| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is chrA1 [H]
Identifier: 222110996
GI number: 222110996
Start: 1919307
End: 1920509
Strand: Direct
Name: chrA1 [H]
Synonym: Dtpsy_1803
Alternate gene names: 222110996
Gene position: 1919307-1920509 (Clockwise)
Preceding gene: 222110995
Following gene: 222111000
Centisome position: 50.55
GC content: 59.35
Gene sequence:
>1203_bases ATGAACGACCTCAACGCAAAGGCAGTGGCCGGCATCAGCACGACAATCACTCCTGGCTACACACTCTGGCAGCTCGTGCG CTACATGCTGGCTTTGGGAACTTGGGGTTTTGGCGGTCCGGTGGCTTTGGCAGGCTACATGTACCGCGATTTGGTGGAAA GACGCCGGTGGATTACCGACGGTGACTACAAAGAAGGCCTAGCACTTGCCCAACTCATGCCTGGGCCACTGGCAGCCCAG CTCGCTATCTACCTGGGCTATGTCCATTATCGATTCCTGGGTGCTTCCCTCGTAGGGATCGCTTTTGTCCTGCCATCCTT CGTGATGGTCGTGGCGCTTGGTGCTGCCTACGTGGCATACGGCGGTATCGGCTGGATGCAATCAGTGTTTTATGGTGTGG GCGCCGCGGTGATCGGCATCATCGCCATGAGCGCCTACAAGTTGACGAGCAAGAGCGTCGGCAGGGACAAACTGCTGTGG CCTATCTTTCTGGTCAGCGCAGCCGTCACAGTGATCACCAAGTCGGAAGTGGTATGGCTCTTCTTCGGTGCAGGTGTGTT GGTCTGGCTCTGGCGGGCGCCGCCCTCCTGGCTGGCGCATAAAAGTGGCCTCAACAGCGTTGGATTGCCTCTGGCCGGGA TGTTCGCACTCAGCACCATCGACTGGACCAAGCTCAAGCAGATCAGCCTTTATTTTGCGTATGCAGGCAGCTTTGTCTTC GGCAGTGGCCTAGCGATCGTTCCCTTCCTCTACGGCGGCGTCGTCAAGGAATACGGCTGGCTGACAGAGCAGCAGTTCGT GGATGCAGTGGCCGTTGCCATGATCACCCCGGGCCCGGTAGTGATCACTACCGGCTTCATCGGCTACCTGGTCACTGGCT TCTGGGGTGCTGTAGCTGCGGCAGCAGCTACCTTCGTACCTTGCTACCTGTTCACGGTGATCCCTGCGCCGTACTTCAAG AAATACGGCAAGCGCCCTGACGTTGTCGCCTTCGTGGACGGCGTCACGGCCGCCGCGATCGGCTCCATCGCAGGGGCGGT GATCGTCATCGGCCAGCGCTCCATTTCCGACTGGATCACTGCTGCGCTGGCCATTGCCACCGCAGCTATCCTGTGGCGCT TCAAAAAACTCCCGGAACCTGTCATCGTGGTTGCAGCAGCTGCTATCGGCCTGGTCGTGCACCCGTTGGTCACGCACGGC TAA
Upstream 100 bases:
>100_bases GACTCACTACTTGCGGACATCAGCGGGGTTTTGGATTCGCTGCATGCGCACTTTTCCGGCCCACGCAAGCCCTAACGCCT CCAGCACCACGGAGATCCAC
Downstream 100 bases:
>100_bases CGACCTGCGAAGCAATCCATCGGGAAATCAATCAGTGTGCGTGCCCCCCAACAACTGCCACAGCCGCAGTGACCAGCAAG GATCCAACTAACAGCCACAC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNDLNAKAVAGISTTITPGYTLWQLVRYMLALGTWGFGGPVALAGYMYRDLVERRRWITDGDYKEGLALAQLMPGPLAAQ LAIYLGYVHYRFLGASLVGIAFVLPSFVMVVALGAAYVAYGGIGWMQSVFYGVGAAVIGIIAMSAYKLTSKSVGRDKLLW PIFLVSAAVTVITKSEVVWLFFGAGVLVWLWRAPPSWLAHKSGLNSVGLPLAGMFALSTIDWTKLKQISLYFAYAGSFVF GSGLAIVPFLYGGVVKEYGWLTEQQFVDAVAVAMITPGPVVITTGFIGYLVTGFWGAVAAAAATFVPCYLFTVIPAPYFK KYGKRPDVVAFVDGVTAAAIGSIAGAVIVIGQRSISDWITAALAIATAAILWRFKKLPEPVIVVAAAAIGLVVHPLVTHG
Sequences:
>Translated_400_residues MNDLNAKAVAGISTTITPGYTLWQLVRYMLALGTWGFGGPVALAGYMYRDLVERRRWITDGDYKEGLALAQLMPGPLAAQ LAIYLGYVHYRFLGASLVGIAFVLPSFVMVVALGAAYVAYGGIGWMQSVFYGVGAAVIGIIAMSAYKLTSKSVGRDKLLW PIFLVSAAVTVITKSEVVWLFFGAGVLVWLWRAPPSWLAHKSGLNSVGLPLAGMFALSTIDWTKLKQISLYFAYAGSFVF GSGLAIVPFLYGGVVKEYGWLTEQQFVDAVAVAMITPGPVVITTGFIGYLVTGFWGAVAAAAATFVPCYLFTVIPAPYFK KYGKRPDVVAFVDGVTAAAIGSIAGAVIVIGQRSISDWITAALAIATAAILWRFKKLPEPVIVVAAAAIGLVVHPLVTHG >Mature_400_residues MNDLNAKAVAGISTTITPGYTLWQLVRYMLALGTWGFGGPVALAGYMYRDLVERRRWITDGDYKEGLALAQLMPGPLAAQ LAIYLGYVHYRFLGASLVGIAFVLPSFVMVVALGAAYVAYGGIGWMQSVFYGVGAAVIGIIAMSAYKLTSKSVGRDKLLW PIFLVSAAVTVITKSEVVWLFFGAGVLVWLWRAPPSWLAHKSGLNSVGLPLAGMFALSTIDWTKLKQISLYFAYAGSFVF GSGLAIVPFLYGGVVKEYGWLTEQQFVDAVAVAMITPGPVVITTGFIGYLVTGFWGAVAAAAATFVPCYLFTVIPAPYFK KYGKRPDVVAFVDGVTAAAIGSIAGAVIVIGQRSISDWITAALAIATAAILWRFKKLPEPVIVVAAAAIGLVVHPLVTHG
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 42598; Mature: 42598
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLNAKAVAGISTTITPGYTLWQLVRYMLALGTWGFGGPVALAGYMYRDLVERRRWITD CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC GDYKEGLALAQLMPGPLAAQLAIYLGYVHYRFLGASLVGIAFVLPSFVMVVALGAAYVAY CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGIGWMQSVFYGVGAAVIGIIAMSAYKLTSKSVGRDKLLWPIFLVSAAVTVITKSEVVWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEE FFGAGVLVWLWRAPPSWLAHKSGLNSVGLPLAGMFALSTIDWTKLKQISLYFAYAGSFVF EEHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH GSGLAIVPFLYGGVVKEYGWLTEQQFVDAVAVAMITPGPVVITTGFIGYLVTGFWGAVAA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHH AAATFVPCYLFTVIPAPYFKKYGKRPDVVAFVDGVTAAAIGSIAGAVIVIGQRSISDWIT HHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHCEEEEECCHHHHHHHH AALAIATAAILWRFKKLPEPVIVVAAAAIGLVVHPLVTHG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDLNAKAVAGISTTITPGYTLWQLVRYMLALGTWGFGGPVALAGYMYRDLVERRRWITD CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC GDYKEGLALAQLMPGPLAAQLAIYLGYVHYRFLGASLVGIAFVLPSFVMVVALGAAYVAY CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGIGWMQSVFYGVGAAVIGIIAMSAYKLTSKSVGRDKLLWPIFLVSAAVTVITKSEVVWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEE FFGAGVLVWLWRAPPSWLAHKSGLNSVGLPLAGMFALSTIDWTKLKQISLYFAYAGSFVF EEHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH GSGLAIVPFLYGGVVKEYGWLTEQQFVDAVAVAMITPGPVVITTGFIGYLVTGFWGAVAA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHH AAATFVPCYLFTVIPAPYFKKYGKRPDVVAFVDGVTAAAIGSIAGAVIVIGQRSISDWIT HHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHCEEEEECCHHHHHHHH AALAIATAAILWRFKKLPEPVIVVAAAAIGLVVHPLVTHG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]