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The map label for this gene is rssA [H]

Identifier: 222110867

GI number: 222110867

Start: 1773681

End: 1774631

Strand: Direct

Name: rssA [H]

Synonym: Dtpsy_1673

Alternate gene names: 222110867

Gene position: 1773681-1774631 (Clockwise)

Preceding gene: 222110866

Following gene: 222110868

Centisome position: 46.72

GC content: 71.08

Gene sequence:

>951_bases
ATGGCACTGACCCGCCGCGCCCCACGGCTGGGCCTTGCGTTGGGCAGCGGCTCGGCGCGCGGCTGGGCGCACATCGGCGT
GCTGCAGGCGCTGCGGGAGGAGGGCGTGCGGCTGGACGTGATCTGCGGCTCCTCCATCGGTGCGCTGGTGGGCGCGGCCT
ACGCGGGGGGCGAACTGGAGCGCTTTGCCGACTGGGTGCAGGGCCTGGGCCTGCGCGATGTGTTCGGCTTCATGGACTTC
AATCTGTCGGGCGGCATGCTCAAGGGCGAAAAGCTCATCGCCTTCTGGCGCCGCAACTTCGCCGATTTCGACATCGACGC
GTCGCCGCTGCCCTTCGGCGCGGTGGCGACCGACCTGCACTCGGGTGCCGAAGTCTGGCTGCGCCACGGCTCCATCGCCG
ACGCGGTGCGCGCTTCCATCGCGCTGCCGGGCCTGTTCACCCCCGTGAACCACACCGACGGGCGGCTGCTGGTGGATGGC
GGACTCGTCAACCCCGTGCCCGCATCGCTGGCCCGCGCCATGGGTGCGGACATCGTCATCGCCGTGGACCTGAATTCCGA
CATCCTGCACCGCCACATGCATCCGCTGGCGGTGGTGCGCGAGCCGCAGGCCTCCGTGCCCACGGATGCGGCGCCGGTCC
CCGGGCCGGAGCCGGTGCCCGAACCGCTGGTCAGCGCCGACTGGATGCGCCGCCTGAAGTTCTGGGCGCCCGCCAGCGGC
GAGGCGCCGCCCCCCAAGCCATCGGCGCTGGACGTGATCATGACCAGCGTGAACATCATGCAGATGCGCATCACCCGCAG
CCGCATGGCGGGTGACCCGCCCGAGGTGGTGATCGCCCCGCGCCTGGCGCATTTGGGCCTGCTGGACTTTCACCGTGCCA
GCGAAGCCATTGCCGAGGGCCGGCGCGCCGCACATGCCAGCCTGCCGCAATTGCGCCAGTTCATGGGCTGA

Upstream 100 bases:

>100_bases
CAAGCTCGCCAAGGCGCAGGAACTGGGCATCCCCGTGCTGGACGAGGACGGGTTGCGTGCGTTGCTGCGGGGCGCGCCGC
CCAACGCAGGTGGGGGCTAG

Downstream 100 bases:

>100_bases
GGTGGTGGCGCGGGCCACCGGGCGGTCAATGGCATCCGTACAGCGGCCCAGCCTGGCGCGGGATTGGCGGTATAAAGCAG
GCCCGGCCCGTCGCCAGGCG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MALTRRAPRLGLALGSGSARGWAHIGVLQALREEGVRLDVICGSSIGALVGAAYAGGELERFADWVQGLGLRDVFGFMDF
NLSGGMLKGEKLIAFWRRNFADFDIDASPLPFGAVATDLHSGAEVWLRHGSIADAVRASIALPGLFTPVNHTDGRLLVDG
GLVNPVPASLARAMGADIVIAVDLNSDILHRHMHPLAVVREPQASVPTDAAPVPGPEPVPEPLVSADWMRRLKFWAPASG
EAPPPKPSALDVIMTSVNIMQMRITRSRMAGDPPEVVIAPRLAHLGLLDFHRASEAIAEGRRAAHASLPQLRQFMG

Sequences:

>Translated_316_residues
MALTRRAPRLGLALGSGSARGWAHIGVLQALREEGVRLDVICGSSIGALVGAAYAGGELERFADWVQGLGLRDVFGFMDF
NLSGGMLKGEKLIAFWRRNFADFDIDASPLPFGAVATDLHSGAEVWLRHGSIADAVRASIALPGLFTPVNHTDGRLLVDG
GLVNPVPASLARAMGADIVIAVDLNSDILHRHMHPLAVVREPQASVPTDAAPVPGPEPVPEPLVSADWMRRLKFWAPASG
EAPPPKPSALDVIMTSVNIMQMRITRSRMAGDPPEVVIAPRLAHLGLLDFHRASEAIAEGRRAAHASLPQLRQFMG
>Mature_315_residues
ALTRRAPRLGLALGSGSARGWAHIGVLQALREEGVRLDVICGSSIGALVGAAYAGGELERFADWVQGLGLRDVFGFMDFN
LSGGMLKGEKLIAFWRRNFADFDIDASPLPFGAVATDLHSGAEVWLRHGSIADAVRASIALPGLFTPVNHTDGRLLVDGG
LVNPVPASLARAMGADIVIAVDLNSDILHRHMHPLAVVREPQASVPTDAAPVPGPEPVPEPLVSADWMRRLKFWAPASGE
APPPKPSALDVIMTSVNIMQMRITRSRMAGDPPEVVIAPRLAHLGLLDFHRASEAIAEGRRAAHASLPQLRQFMG

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=186, Percent_Identity=38.1720430107527, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI116256487, Length=186, Percent_Identity=38.1720430107527, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI260656037, Length=186, Percent_Identity=38.1720430107527, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI260656039, Length=186, Percent_Identity=38.1720430107527, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI260656043, Length=186, Percent_Identity=38.1720430107527, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI148727290, Length=184, Percent_Identity=36.9565217391304, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI148727335, Length=184, Percent_Identity=36.9565217391304, Blast_Score=101, Evalue=1e-21,
Organism=Escherichia coli, GI226510936, Length=308, Percent_Identity=40.5844155844156, Blast_Score=226, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI193204778, Length=166, Percent_Identity=33.1325301204819, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71997299, Length=179, Percent_Identity=34.6368715083799, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71997289, Length=179, Percent_Identity=34.6368715083799, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323581, Length=187, Percent_Identity=31.5508021390374, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571388, Length=184, Percent_Identity=32.6086956521739, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI281376913, Length=184, Percent_Identity=31.5217391304348, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33697; Mature: 33566

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTRRAPRLGLALGSGSARGWAHIGVLQALREEGVRLDVICGSSIGALVGAAYAGGELE
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCHHH
RFADWVQGLGLRDVFGFMDFNLSGGMLKGEKLIAFWRRNFADFDIDASPLPFGAVATDLH
HHHHHHHCCCHHHHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
SGAEVWLRHGSIADAVRASIALPGLFTPVNHTDGRLLVDGGLVNPVPASLARAMGADIVI
CCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEE
AVDLNSDILHRHMHPLAVVREPQASVPTDAAPVPGPEPVPEPLVSADWMRRLKFWAPASG
EEECCHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
EAPPPKPSALDVIMTSVNIMQMRITRSRMAGDPPEVVIAPRLAHLGLLDFHRASEAIAEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHCHHHHHHHHHHHHHH
RRAAHASLPQLRQFMG
HHHHHCCHHHHHHHCC
>Mature Secondary Structure 
ALTRRAPRLGLALGSGSARGWAHIGVLQALREEGVRLDVICGSSIGALVGAAYAGGELE
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCHHH
RFADWVQGLGLRDVFGFMDFNLSGGMLKGEKLIAFWRRNFADFDIDASPLPFGAVATDLH
HHHHHHHCCCHHHHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
SGAEVWLRHGSIADAVRASIALPGLFTPVNHTDGRLLVDGGLVNPVPASLARAMGADIVI
CCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEE
AVDLNSDILHRHMHPLAVVREPQASVPTDAAPVPGPEPVPEPLVSADWMRRLKFWAPASG
EEECCHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
EAPPPKPSALDVIMTSVNIMQMRITRSRMAGDPPEVVIAPRLAHLGLLDFHRASEAIAEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHCHHHHHHHHHHHHHH
RRAAHASLPQLRQFMG
HHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]