| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is guaB [H]
Identifier: 222110463
GI number: 222110463
Start: 1321740
End: 1323215
Strand: Direct
Name: guaB [H]
Synonym: Dtpsy_1260
Alternate gene names: 222110463
Gene position: 1321740-1323215 (Clockwise)
Preceding gene: 222110461
Following gene: 222110464
Centisome position: 34.81
GC content: 65.24
Gene sequence:
>1476_bases ATGCGCCTTCTTGGAAAAGCGCTCACCTTCGACGATGTGTTGTTGGTGCCGGCGTACTCCCAGGTCCTGCCCAAGGACAC CTCCCTCGTCACGCGCTTTACGCGCAACATCACCCTGAACCTCCCGCTCGTGTCCGCCGCCATGGACACCGTGACCGAAG CGCGTCTGGCCATCGCCATCGCGCAAGAAGGGGGGATTGGCGTCATCCACAAGAACATGACGGCCGAGCAGCAGGCGGCC GAGGTGTCAAAGGTCAAGCGGCATGAGTCCGGCGTGGTGCACGATCCCGTGGTCATCACGCCCGAACACACGGTGCTGCA GGTGCTGGAACTGTCCGAGAACCTGGGCATCTCGGGCTTCCCGGTCTGTGATGGTGGCAAGGTGGTGGGCATCGTCACCA GCCGCGACGTGCGCTTCGAGACGCGCTACGACGTCAAGGTGCGTGAGATCATGACGCCGCGCGAGAAGCTGATCACCGTC AACGAAAAAGACGGCACCACCCCAGCCCAGGCCAAGGCGCTGCTCAACCGCCACAAGCTGGAGCGCCTGCTGGTGGTGAA CGACGCCTTTGAGCTCAAGGGCCTCATCACGGTCAAGGACATCAACAAGCAGACCACGTTCCCCAACGCCGCGCGCGATG CGGCAGGCCGCCTGCGCGTGGCCGCTGCCGTGGGCGTCGGCGCGGGCACCGAAGAGCGCGTGGCGTTGCTGGTCAAGGCC GGTGTGGATGCCATCGTGGTGGATACAGCCCACGGCCACAGCAAAGGTGTGATCGACCGCGTGCGCTGGGTCAAACAGAA CTACCCGCAGGTGGACGTGATCGGCGGCAACATCGCCACCGGCGCTGCCGCGCTGGCCCTGGCCGAGGCAGGCGCCGATG CGGTCAAGGTCGGCATCGGTCCCGGCTCCATCTGCACCACACGCATCGTGGCTGGCGTGGGTGTACCCCAGATCATGGCC ATCGACAGCGTCGCCACCGCGCTTCAGGGCACAGGGGTGCCGCTGATCGCCGATGGCGGCATCCGCTTCTCGGGGGATAT TGCCAAGGCGCTGGCCGCGGGCGCGTCGACCATCATGATGGGCGGCATGTTTGCTGGCACCGAAGAAGCGCCCGGCGAAG TCATCCTGTACCAGGGCCGCTCCTACAAAAGCTACCGTGGCATGGGCTCGATCGGCGCCATGCAGCAGGGCTCGGCCGAC CGCTACTTCCAGGAAGCCACCACGGGCAATCCCAACGCCGACAAGCTGGTGCCCGAAGGCATCGAAGGCCGCGTGCCCTA CAAGGGCTCCATGGTGTCCATCGTGTTCCAGATGGCCGGCGGCGTGCGTGCGGCCATGGGCTACTGTGGTTGCGCAACCA TCGAAGAGATGAACAACAAGGCCGAATTCGTGGAGATCACGGCGGCTGGCATCCGCGAGTCGCACGTGCACGACGTGCAG ATCACCAAGGAAGCCCCCAACTACCGGGCGGACTGA
Upstream 100 bases:
>100_bases CGAGTGTAGCGGTGAGCGGCTGCACCCACCAAGGGGCGTTCACTCGGGGTGTGTGCGATTTGTCGCGCGGCGGGTACAAT CCTTTTTTTGGAGCTTTCAC
Downstream 100 bases:
>100_bases GTTTTCGCCATTCCGCAGGCCCGAACCCGTCTCCAGGTGTTCGGGCCTTTTGTCTTTTACCGACCCTGTCGCTCTCCATG CAACACGACAAGATCCTCAT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MRLLGKALTFDDVLLVPAYSQVLPKDTSLVTRFTRNITLNLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAA EVSKVKRHESGVVHDPVVITPEHTVLQVLELSENLGISGFPVCDGGKVVGIVTSRDVRFETRYDVKVREIMTPREKLITV NEKDGTTPAQAKALLNRHKLERLLVVNDAFELKGLITVKDINKQTTFPNAARDAAGRLRVAAAVGVGAGTEERVALLVKA GVDAIVVDTAHGHSKGVIDRVRWVKQNYPQVDVIGGNIATGAAALALAEAGADAVKVGIGPGSICTTRIVAGVGVPQIMA IDSVATALQGTGVPLIADGGIRFSGDIAKALAAGASTIMMGGMFAGTEEAPGEVILYQGRSYKSYRGMGSIGAMQQGSAD RYFQEATTGNPNADKLVPEGIEGRVPYKGSMVSIVFQMAGGVRAAMGYCGCATIEEMNNKAEFVEITAAGIRESHVHDVQ ITKEAPNYRAD
Sequences:
>Translated_491_residues MRLLGKALTFDDVLLVPAYSQVLPKDTSLVTRFTRNITLNLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAA EVSKVKRHESGVVHDPVVITPEHTVLQVLELSENLGISGFPVCDGGKVVGIVTSRDVRFETRYDVKVREIMTPREKLITV NEKDGTTPAQAKALLNRHKLERLLVVNDAFELKGLITVKDINKQTTFPNAARDAAGRLRVAAAVGVGAGTEERVALLVKA GVDAIVVDTAHGHSKGVIDRVRWVKQNYPQVDVIGGNIATGAAALALAEAGADAVKVGIGPGSICTTRIVAGVGVPQIMA IDSVATALQGTGVPLIADGGIRFSGDIAKALAAGASTIMMGGMFAGTEEAPGEVILYQGRSYKSYRGMGSIGAMQQGSAD RYFQEATTGNPNADKLVPEGIEGRVPYKGSMVSIVFQMAGGVRAAMGYCGCATIEEMNNKAEFVEITAAGIRESHVHDVQ ITKEAPNYRAD >Mature_491_residues MRLLGKALTFDDVLLVPAYSQVLPKDTSLVTRFTRNITLNLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAA EVSKVKRHESGVVHDPVVITPEHTVLQVLELSENLGISGFPVCDGGKVVGIVTSRDVRFETRYDVKVREIMTPREKLITV NEKDGTTPAQAKALLNRHKLERLLVVNDAFELKGLITVKDINKQTTFPNAARDAAGRLRVAAAVGVGAGTEERVALLVKA GVDAIVVDTAHGHSKGVIDRVRWVKQNYPQVDVIGGNIATGAAALALAEAGADAVKVGIGPGSICTTRIVAGVGVPQIMA IDSVATALQGTGVPLIADGGIRFSGDIAKALAAGASTIMMGGMFAGTEEAPGEVILYQGRSYKSYRGMGSIGAMQQGSAD RYFQEATTGNPNADKLVPEGIEGRVPYKGSMVSIVFQMAGGVRAAMGYCGCATIEEMNNKAEFVEITAAGIRESHVHDVQ ITKEAPNYRAD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=456, Percent_Identity=43.640350877193, Blast_Score=344, Evalue=9e-95, Organism=Homo sapiens, GI66933016, Length=490, Percent_Identity=41.0204081632653, Blast_Score=344, Evalue=1e-94, Organism=Homo sapiens, GI156616279, Length=456, Percent_Identity=43.640350877193, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI34328930, Length=456, Percent_Identity=43.640350877193, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI34328928, Length=456, Percent_Identity=43.640350877193, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI217035152, Length=452, Percent_Identity=43.5840707964602, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI217035148, Length=456, Percent_Identity=42.7631578947368, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI217035150, Length=456, Percent_Identity=40.1315789473684, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI156104880, Length=250, Percent_Identity=36, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541956, Length=251, Percent_Identity=36.2549800796813, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI50541954, Length=251, Percent_Identity=36.2549800796813, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI50541952, Length=251, Percent_Identity=36.2549800796813, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI50541948, Length=251, Percent_Identity=36.2549800796813, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1788855, Length=490, Percent_Identity=61.4285714285714, Blast_Score=555, Evalue=1e-159, Organism=Escherichia coli, GI1786293, Length=265, Percent_Identity=30.5660377358491, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71994385, Length=482, Percent_Identity=36.3070539419087, Blast_Score=274, Evalue=6e-74, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=39.0995260663507, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17560440, Length=280, Percent_Identity=32.8571428571429, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6322012, Length=489, Percent_Identity=38.8548057259714, Blast_Score=336, Evalue=6e-93, Organism=Saccharomyces cerevisiae, GI6323585, Length=489, Percent_Identity=39.0593047034765, Blast_Score=331, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=489, Percent_Identity=38.6503067484663, Blast_Score=322, Evalue=7e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=340, Percent_Identity=37.9411764705882, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6319353, Length=114, Percent_Identity=42.1052631578947, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641071, Length=489, Percent_Identity=40.081799591002, Blast_Score=343, Evalue=2e-94, Organism=Drosophila melanogaster, GI24641073, Length=489, Percent_Identity=40.081799591002, Blast_Score=343, Evalue=2e-94, Organism=Drosophila melanogaster, GI28571163, Length=446, Percent_Identity=40.5829596412556, Blast_Score=310, Evalue=2e-84,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51792; Mature: 51792
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLGKALTFDDVLLVPAYSQVLPKDTSLVTRFTRNITLNLPLVSAAMDTVTEARLAIAI CCCCCCCCCCCCEEEECCHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHCEEEEEE AQEGGIGVIHKNMTAEQQAAEVSKVKRHESGVVHDPVVITPEHTVLQVLELSENLGISGF ECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEECCEEECCCHHHHHHHHHHHCCCCCCC PVCDGGKVVGIVTSRDVRFETRYDVKVREIMTPREKLITVNEKDGTTPAQAKALLNRHKL EECCCCEEEEEEECCCEEEEEECCEEHHHHCCCCHHEEEEECCCCCCHHHHHHHHHHHHH ERLLVVNDAFELKGLITVKDINKQTTFPNAARDAAGRLRVAAAVGVGAGTEERVALLVKA HEEEEEECCCHHCEEEEEEECCCCCCCCCHHHHHCCCEEEEEEEECCCCCHHHEEEEEEC GVDAIVVDTAHGHSKGVIDRVRWVKQNYPQVDVIGGNIATGAAALALAEAGADAVKVGIG CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC PGSICTTRIVAGVGVPQIMAIDSVATALQGTGVPLIADGGIRFSGDIAKALAAGASTIMM CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCHHHHHHHCCCHHEEE GGMFAGTEEAPGEVILYQGRSYKSYRGMGSIGAMQQGSADRYFQEATTGNPNADKLVPEG CCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC IEGRVPYKGSMVSIVFQMAGGVRAAMGYCGCATIEEMNNKAEFVEITAAGIRESHVHDVQ CCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEE ITKEAPNYRAD EEECCCCCCCC >Mature Secondary Structure MRLLGKALTFDDVLLVPAYSQVLPKDTSLVTRFTRNITLNLPLVSAAMDTVTEARLAIAI CCCCCCCCCCCCEEEECCHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHCEEEEEE AQEGGIGVIHKNMTAEQQAAEVSKVKRHESGVVHDPVVITPEHTVLQVLELSENLGISGF ECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEECCEEECCCHHHHHHHHHHHCCCCCCC PVCDGGKVVGIVTSRDVRFETRYDVKVREIMTPREKLITVNEKDGTTPAQAKALLNRHKL EECCCCEEEEEEECCCEEEEEECCEEHHHHCCCCHHEEEEECCCCCCHHHHHHHHHHHHH ERLLVVNDAFELKGLITVKDINKQTTFPNAARDAAGRLRVAAAVGVGAGTEERVALLVKA HEEEEEECCCHHCEEEEEEECCCCCCCCCHHHHHCCCEEEEEEEECCCCCHHHEEEEEEC GVDAIVVDTAHGHSKGVIDRVRWVKQNYPQVDVIGGNIATGAAALALAEAGADAVKVGIG CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC PGSICTTRIVAGVGVPQIMAIDSVATALQGTGVPLIADGGIRFSGDIAKALAAGASTIMM CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCHHHHHHHCCCHHEEE GGMFAGTEEAPGEVILYQGRSYKSYRGMGSIGAMQQGSADRYFQEATTGNPNADKLVPEG CCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC IEGRVPYKGSMVSIVFQMAGGVRAAMGYCGCATIEEMNNKAEFVEITAAGIRESHVHDVQ CCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCCCCEEEE ITKEAPNYRAD EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA