Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is yfjF [C]

Identifier: 222110461

GI number: 222110461

Start: 1320708

End: 1321052

Strand: Direct

Name: yfjF [C]

Synonym: Dtpsy_1258

Alternate gene names: 222110461

Gene position: 1320708-1321052 (Clockwise)

Preceding gene: 222110460

Following gene: 222110463

Centisome position: 34.79

GC content: 68.41

Gene sequence:

>345_bases
ATGGCTGAAACCTTGCCCCCGCCGGAGCGGCTGCGCATCGCGGTGGCCATCTCGCGGCAACCGGGCGATGTGCACGAGTG
GGTGCTACTGCTTCCGGTCGGTGCTACGGTGGCCGATGCTCTGAGCGCCTGCGGACTGGATGCACAGGCTGAGGGGCTTG
TCTGGGGCATTTGGGGCAGGGAAGGCAGACTGGACGACCTGTTGCACGATGGTGACCGCGTGGAAGGCTGCCGCCCCTTG
CGGGTTGACCCGAAGCTGGCGCGCCGCCAGCGCTTTGCGCGCCAGGGCGCTCGTGCGGCGGGATTGTTCGCCAAACGCCG
GCCGGGGGCCAAGTCCGGTTATTGA

Upstream 100 bases:

>100_bases
GGCTTTGACAACCGGGCATTGGCGGCGTTGGTCGGCCCCGTGTTTGACCGCATCGCCGCCACGTTCATCGATGCCTTCAT
CAAACGGGCCGAGCAGGTTT

Downstream 100 bases:

>100_bases
GAGTGCTTATCAGCATGCGCTGAAACAAAACGGCCGCCTCATCCATGCAGAAGGGCGGCCGGTGGCGCGGTTATGGGGTA
GCTGCTACTTGCAGTCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAETLPPPERLRIAVAISRQPGDVHEWVLLLPVGATVADALSACGLDAQAEGLVWGIWGREGRLDDLLHDGDRVEGCRPL
RVDPKLARRQRFARQGARAAGLFAKRRPGAKSGY

Sequences:

>Translated_114_residues
MAETLPPPERLRIAVAISRQPGDVHEWVLLLPVGATVADALSACGLDAQAEGLVWGIWGREGRLDDLLHDGDRVEGCRPL
RVDPKLARRQRFARQGARAAGLFAKRRPGAKSGY
>Mature_113_residues
AETLPPPERLRIAVAISRQPGDVHEWVLLLPVGATVADALSACGLDAQAEGLVWGIWGREGRLDDLLHDGDRVEGCRPLR
VDPKLARRQRFARQGARAAGLFAKRRPGAKSGY

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12417; Mature: 12286

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETLPPPERLRIAVAISRQPGDVHEWVLLLPVGATVADALSACGLDAQAEGLVWGIWGR
CCCCCCCHHHEEEEEEEECCCCCHHCEEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCC
EGRLDDLLHDGDRVEGCRPLRVDPKLARRQRFARQGARAAGLFAKRRPGAKSGY
CCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AETLPPPERLRIAVAISRQPGDVHEWVLLLPVGATVADALSACGLDAQAEGLVWGIWGR
CCCCCCHHHEEEEEEEECCCCCHHCEEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCC
EGRLDDLLHDGDRVEGCRPLRVDPKLARRQRFARQGARAAGLFAKRRPGAKSGY
CCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA