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The map label for this gene is yqeB [H]

Identifier: 222110258

GI number: 222110258

Start: 1086022

End: 1086846

Strand: Direct

Name: yqeB [H]

Synonym: Dtpsy_1045

Alternate gene names: 222110258

Gene position: 1086022-1086846 (Clockwise)

Preceding gene: 222110256

Following gene: 222110260

Centisome position: 28.61

GC content: 71.76

Gene sequence:

>825_bases
GTGAAGGCATTGGACTGCCTGCTGGAGCGTATCAAGACCGCACCCGCCTGCCTGGTGACGGTGGAGTCTACCCAAGGCTC
GGCGCCGCGGGAAGCCGGGGCATGGCTGGCGGTGTTCGCGGTGGGCGACGACTTCGTCGGCACCATCGGTGGCGGCCATC
TGGAACTGCAGGCGCTGCGCGAAGCGCGTGAACGCCTGGCGGAGCACCTGGCTGGCAACCCTTCGCGCATGCCGCGCGTG
CGACATGCGCTGGGCCCCAGCCTGGGGCAGTGCTGCGGCGGCGTGGTGCAGCTGCGGTTTGAATGCGTGGGGGCTGCTGA
CGCGCCGGCCTTGCGCCAACGTCTGGCGCCGCGGCTGCAGCCGGTGGCGCTTTTCGGCGGCGGCCATGTGGGGCATGCGC
TGGCGCGGGTGCTGGCGCCGCTGCCGTTTGCGCTGCACTGGATCGACAGCCGCGATGGCGTGTTCCCGCCGCAGGGGGAC
GGCGCGTCCGTGGTCTGTGAGCAGTCCGACCCGGTACAGGCGGCCGTGCCGGGTGTGGCACCGCAGTCCTTCGTGCTCAT
CATGAGCTTCAGCCACGCGGAGGATCTGGACATCGTGGCGGCGTGCCTCGCACGGCAGCGGGCGCGCGGCGATCTGCCGT
TCATCGGCCTGATCGGCAGCCGCACCAAGTGGGCCACCTTCCGGCACCGGCTGGCGGCGCGGGGGTTCTCGGATACCGAG
CTGGCGCAGGTGACCTGCCCGATCGGCGTGCCCGGAATCGCCGGCAAGCAGCCCGAGGTGATCGCCGTGGCCGTGGCCGC
GCAGTTGCTGCAGCGGCTGGCCTGA

Upstream 100 bases:

>100_bases
CGGGGCAGAAGGCAGCTGTGGCATGGTGTTTGTCGCTATGCTGTACCGCGGCCACGACCGAGGCGGTGGCGCGCATGAAT
CAAGCTGGAGGAATCAGCGA

Downstream 100 bases:

>100_bases
GATTGCGTATAAAAATGGCTGCTGGCGCTTATGGAGCGAGCGCCAGCAGCTATTAATACAGGAGTTGCGTGGGTCACGCC
AGCGTATAGGCCGTCTTCAC

Product: xanthine dehydrogenase accessory protein xdhc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKALDCLLERIKTAPACLVTVESTQGSAPREAGAWLAVFAVGDDFVGTIGGGHLELQALREARERLAEHLAGNPSRMPRV
RHALGPSLGQCCGGVVQLRFECVGAADAPALRQRLAPRLQPVALFGGGHVGHALARVLAPLPFALHWIDSRDGVFPPQGD
GASVVCEQSDPVQAAVPGVAPQSFVLIMSFSHAEDLDIVAACLARQRARGDLPFIGLIGSRTKWATFRHRLAARGFSDTE
LAQVTCPIGVPGIAGKQPEVIAVAVAAQLLQRLA

Sequences:

>Translated_274_residues
MKALDCLLERIKTAPACLVTVESTQGSAPREAGAWLAVFAVGDDFVGTIGGGHLELQALREARERLAEHLAGNPSRMPRV
RHALGPSLGQCCGGVVQLRFECVGAADAPALRQRLAPRLQPVALFGGGHVGHALARVLAPLPFALHWIDSRDGVFPPQGD
GASVVCEQSDPVQAAVPGVAPQSFVLIMSFSHAEDLDIVAACLARQRARGDLPFIGLIGSRTKWATFRHRLAARGFSDTE
LAQVTCPIGVPGIAGKQPEVIAVAVAAQLLQRLA
>Mature_274_residues
MKALDCLLERIKTAPACLVTVESTQGSAPREAGAWLAVFAVGDDFVGTIGGGHLELQALREARERLAEHLAGNPSRMPRV
RHALGPSLGQCCGGVVQLRFECVGAADAPALRQRLAPRLQPVALFGGGHVGHALARVLAPLPFALHWIDSRDGVFPPQGD
GASVVCEQSDPVQAAVPGVAPQSFVLIMSFSHAEDLDIVAACLARQRARGDLPFIGLIGSRTKWATFRHRLAARGFSDTE
LAQVTCPIGVPGIAGKQPEVIAVAVAAQLLQRLA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=267, Percent_Identity=27.3408239700375, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 28827; Mature: 28827

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALDCLLERIKTAPACLVTVESTQGSAPREAGAWLAVFAVGDDFVGTIGGGHLELQALR
CCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHH
EARERLAEHLAGNPSRMPRVRHALGPSLGQCCGGVVQLRFECVGAADAPALRQRLAPRLQ
HHHHHHHHHHCCCCHHCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
PVALFGGGHVGHALARVLAPLPFALHWIDSRDGVFPPQGDGASVVCEQSDPVQAAVPGVA
EEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
PQSFVLIMSFSHAEDLDIVAACLARQRARGDLPFIGLIGSRTKWATFRHRLAARGFSDTE
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCC
LAQVTCPIGVPGIAGKQPEVIAVAVAAQLLQRLA
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKALDCLLERIKTAPACLVTVESTQGSAPREAGAWLAVFAVGDDFVGTIGGGHLELQALR
CCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHH
EARERLAEHLAGNPSRMPRVRHALGPSLGQCCGGVVQLRFECVGAADAPALRQRLAPRLQ
HHHHHHHHHHCCCCHHCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
PVALFGGGHVGHALARVLAPLPFALHWIDSRDGVFPPQGDGASVVCEQSDPVQAAVPGVA
EEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
PQSFVLIMSFSHAEDLDIVAACLARQRARGDLPFIGLIGSRTKWATFRHRLAARGFSDTE
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCC
LAQVTCPIGVPGIAGKQPEVIAVAVAAQLLQRLA
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]