Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222110148

Identifier: 222110148

GI number: 222110148

Start: 959520

End: 960983

Strand: Direct

Name: 222110148

Synonym: Dtpsy_0934

Alternate gene names: NA

Gene position: 959520-960983 (Clockwise)

Preceding gene: 222110147

Following gene: 222110149

Centisome position: 25.27

GC content: 67.55

Gene sequence:

>1464_bases
ATGCAGCAGTTCGACGAGATGTACACCGTGCTGCCCTTCGGGGGCAGCGACGTGCGGGCGCACTACCGGCATTACGGCCA
GTGGCTGGCGCAGCAGCCGGCCGATGCCATGCAGGCCCGCCGCGCGCAGGCCGAGGTGATCTTCCGCCGCGTGGGCATCA
CCTTCGCCGTGTATGGCGACAAGGACGAGGAGGGCGCCGGGACCGAGCGGCTGATCCCCTTCGACCTGATTCCGCGCATC
ATCCCCGCGCAGGAATGGCGCCGCATGCGGCGCGGCCTGGTGCAGCGCGTCACGGCGCTCAACCGCTTCATCCACGACAT
CTACCACGGCCAGGACATCCTGCGCGCAGGCATCGTGCCTGCCGACCTGATCCTGGCCAATGCGCAGTTCCGTCCCGAGA
TGGTGGGCCTGGACGTCCCGCAGGACGTGTACGCGCACATCGCGGGCATCGACCTCGTGCGCGCGCCGGGCGCGGATGGC
GAGGGCATCCACTACGTGCTGGAGGACAACCTGCGCGTGCCGTCCGGCGTGTCATACATGCTGGAAAACCGCAAGATGAT
GATGCGGCTGTTTCCCGAGCTGTTTGCGCTGCACAAGGTGGCCCCCGTGGCGCACTATCCCGACCTGCTGCTGGACACGC
TGCGTGCCAGCGCGCCGGCCTGGAGCAGCGCCGACCCCACCGTGGTGGTGCTCACGCCCGGCATGCACAACAGCGCCTAT
TTCGAGCACGCCTTCCTCGCGCAGCAGATGGGCGTGGAGCTGGTCGAAGGCCAGGACCTGGTCGTCAAGGACAACGTCGT
CTACATGCGCACCACGCGCGGCCTGCAGCGCGTGCATGTCATCTACCGGCGCGTGGATGACGACTTCCTCGACCCACAGG
TGTTCCGGCCCACCTCCACACTGGGCTGCGCGGGGCTCATGCAGGCCTACCGCGCGGGCAACGTGGCCATTTGCAACGCC
GTGGGTACAGGCATTGCGGACGACAAGTCGGTGTACCCGTACGTGCCCGAGATGATCCGCTTTTACCTGGGCGAGCAGCC
CATCCTGGCCAACGTGCCCACCTGGATGTGCCGCCGCCCTGAAGACCTGCAGTACGTGCTGGGGCATCTGCCGGAGCTGG
TGGTCAAGGAAGTGCACGGCGCGGGCGGCTACGGCATGCTCATCGGACCCGCGGCCACGCGCGCCGAGATCGAGGACTTC
CGCGCCGCGCTCCTCGCTAATCCCGCGGGCTACATCGCCCAGCCCACGCTCTCGCTCTCGACCTGTCCTACCTACGTGGA
TGCGGGCATCGCGCCGCGCCACATCGATCTGCGGCCCTTCGTGCTCAGTGGACAGAAAGTGCAGATGGTGGCCGGCGGGC
TCACGCGCGTGGCGCTCAAGGAGGGCTCGCTCGTCGTCAACTCGTCGCAGGGTGGCGGCACCAAGGACACCTGGGTGCTG
GGAGATGAGGATGGAGGTCAATGA

Upstream 100 bases:

>100_bases
GCGCTACTGGCACCACCGCGTGTCCGAGGCGTCACTTTTGCCGCAGCCGTAGCGTTGCCGGGCCTGCAACTTGCTATCCT
GGGTGCAGGAGGCACGCCGC

Downstream 100 bases:

>100_bases
GATGCTGAGCCGCACTGCCGACCATCTGTTCTGGATGTCCCGCTACACCGAGCGGGCAGACAGGTCCGCCGCAGGCGGGC
TTGCGCCACAACACGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MQQFDEMYTVLPFGGSDVRAHYRHYGQWLAQQPADAMQARRAQAEVIFRRVGITFAVYGDKDEEGAGTERLIPFDLIPRI
IPAQEWRRMRRGLVQRVTALNRFIHDIYHGQDILRAGIVPADLILANAQFRPEMVGLDVPQDVYAHIAGIDLVRAPGADG
EGIHYVLEDNLRVPSGVSYMLENRKMMMRLFPELFALHKVAPVAHYPDLLLDTLRASAPAWSSADPTVVVLTPGMHNSAY
FEHAFLAQQMGVELVEGQDLVVKDNVVYMRTTRGLQRVHVIYRRVDDDFLDPQVFRPTSTLGCAGLMQAYRAGNVAICNA
VGTGIADDKSVYPYVPEMIRFYLGEQPILANVPTWMCRRPEDLQYVLGHLPELVVKEVHGAGGYGMLIGPAATRAEIEDF
RAALLANPAGYIAQPTLSLSTCPTYVDAGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVL
GDEDGGQ

Sequences:

>Translated_487_residues
MQQFDEMYTVLPFGGSDVRAHYRHYGQWLAQQPADAMQARRAQAEVIFRRVGITFAVYGDKDEEGAGTERLIPFDLIPRI
IPAQEWRRMRRGLVQRVTALNRFIHDIYHGQDILRAGIVPADLILANAQFRPEMVGLDVPQDVYAHIAGIDLVRAPGADG
EGIHYVLEDNLRVPSGVSYMLENRKMMMRLFPELFALHKVAPVAHYPDLLLDTLRASAPAWSSADPTVVVLTPGMHNSAY
FEHAFLAQQMGVELVEGQDLVVKDNVVYMRTTRGLQRVHVIYRRVDDDFLDPQVFRPTSTLGCAGLMQAYRAGNVAICNA
VGTGIADDKSVYPYVPEMIRFYLGEQPILANVPTWMCRRPEDLQYVLGHLPELVVKEVHGAGGYGMLIGPAATRAEIEDF
RAALLANPAGYIAQPTLSLSTCPTYVDAGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVL
GDEDGGQ
>Mature_487_residues
MQQFDEMYTVLPFGGSDVRAHYRHYGQWLAQQPADAMQARRAQAEVIFRRVGITFAVYGDKDEEGAGTERLIPFDLIPRI
IPAQEWRRMRRGLVQRVTALNRFIHDIYHGQDILRAGIVPADLILANAQFRPEMVGLDVPQDVYAHIAGIDLVRAPGADG
EGIHYVLEDNLRVPSGVSYMLENRKMMMRLFPELFALHKVAPVAHYPDLLLDTLRASAPAWSSADPTVVVLTPGMHNSAY
FEHAFLAQQMGVELVEGQDLVVKDNVVYMRTTRGLQRVHVIYRRVDDDFLDPQVFRPTSTLGCAGLMQAYRAGNVAICNA
VGTGIADDKSVYPYVPEMIRFYLGEQPILANVPTWMCRRPEDLQYVLGHLPELVVKEVHGAGGYGMLIGPAATRAEIEDF
RAALLANPAGYIAQPTLSLSTCPTYVDAGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVL
GDEDGGQ

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 53834; Mature: 53834

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQFDEMYTVLPFGGSDVRAHYRHYGQWLAQQPADAMQARRAQAEVIFRRVGITFAVYGD
CCCHHCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEECC
KDEEGAGTERLIPFDLIPRIIPAQEWRRMRRGLVQRVTALNRFIHDIYHGQDILRAGIVP
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
ADLILANAQFRPEMVGLDVPQDVYAHIAGIDLVRAPGADGEGIHYVLEDNLRVPSGVSYM
HHHEEECCCCCCCEECCCCCHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCHHHH
LENRKMMMRLFPELFALHKVAPVAHYPDLLLDTLRASAPAWSSADPTVVVLTPGMHNSAY
HHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHH
FEHAFLAQQMGVELVEGQDLVVKDNVVYMRTTRGLQRVHVIYRRVDDDFLDPQVFRPTST
HHHHHHHHHHCCEEECCCCEEEECCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
LGCAGLMQAYRAGNVAICNAVGTGIADDKSVYPYVPEMIRFYLGEQPILANVPTWMCRRP
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHCCC
EDLQYVLGHLPELVVKEVHGAGGYGMLIGPAATRAEIEDFRAALLANPAGYIAQPTLSLS
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCC
TCPTYVDAGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVL
CCCHHHHCCCCCCEECCCCEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCEEEE
GDEDGGQ
CCCCCCC
>Mature Secondary Structure
MQQFDEMYTVLPFGGSDVRAHYRHYGQWLAQQPADAMQARRAQAEVIFRRVGITFAVYGD
CCCHHCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEECC
KDEEGAGTERLIPFDLIPRIIPAQEWRRMRRGLVQRVTALNRFIHDIYHGQDILRAGIVP
CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
ADLILANAQFRPEMVGLDVPQDVYAHIAGIDLVRAPGADGEGIHYVLEDNLRVPSGVSYM
HHHEEECCCCCCCEECCCCCHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCCHHHH
LENRKMMMRLFPELFALHKVAPVAHYPDLLLDTLRASAPAWSSADPTVVVLTPGMHNSAY
HHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHH
FEHAFLAQQMGVELVEGQDLVVKDNVVYMRTTRGLQRVHVIYRRVDDDFLDPQVFRPTST
HHHHHHHHHHCCEEECCCCEEEECCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
LGCAGLMQAYRAGNVAICNAVGTGIADDKSVYPYVPEMIRFYLGEQPILANVPTWMCRRP
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHCCC
EDLQYVLGHLPELVVKEVHGAGGYGMLIGPAATRAEIEDFRAALLANPAGYIAQPTLSLS
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCC
TCPTYVDAGIAPRHIDLRPFVLSGQKVQMVAGGLTRVALKEGSLVVNSSQGGGTKDTWVL
CCCHHHHCCCCCCEECCCCEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCEEEE
GDEDGGQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]