Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222110049

Identifier: 222110049

GI number: 222110049

Start: 867016

End: 867369

Strand: Direct

Name: 222110049

Synonym: Dtpsy_0835

Alternate gene names: NA

Gene position: 867016-867369 (Clockwise)

Preceding gene: 222110044

Following gene: 222110050

Centisome position: 22.84

GC content: 64.41

Gene sequence:

>354_bases
ATGCCCCATTCCCCCATCACCGCAGGAACCAAAGTCGTCTACCAGGAAGGCGTCTACACGGTCCGCGCCGTAGACGGCAA
CGTTCTCGAGCTGGCTTACCACACGGGCGATTTCTTCCGCCTGGTGCACGCCTCCAGCGTCCTCGTTTGCCCACCCCCTG
CCACCCAAACGGCGGCCAGCTTGCCGGCTCCAGTCGCCGGGCAGGGGGCGGGCACCCCTTCTGCGTTCCTCGCATGGGAA
TGTGTCGATGGACCTGATCCTCTGCCGCGTTGGGAGCGGCACTGCGGCTCTCGATCTGAGGTGTTGATCGGTGCCTCCTT
TGCCCTGTTGCTGGACCCTTGGGGCAACGTATGA

Upstream 100 bases:

>100_bases
ACACGAGTTGAATAAATCATACTAGGCTCTTGTTATTCCTTGTGAATAACGATAGGCTCCGTTCGTTACGCGACTTGTGT
AACGCATCTAGGAGCCGGCA

Downstream 100 bases:

>100_bases
GGCTCGTCTCCAAACACGCCCAGGTCGGCTACCAGACCCCCGGCGAGCGCCCCGGCTGCCGCAACTGCGCGCACTTTGAA
GTCACGCGCCATGACAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAASLPAPVAGQGAGTPSAFLAWE
CVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV

Sequences:

>Translated_117_residues
MPHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAASLPAPVAGQGAGTPSAFLAWE
CVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV
>Mature_116_residues
PHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAASLPAPVAGQGAGTPSAFLAWEC
VDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12339; Mature: 12208

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAAS
CCCCCCCCCCEEEEECCEEEEEEECCCEEEEEECCCCEEEEECCCEEEEECCCCCCCHHC
LPAPVAGQGAGTPSAFLAWECVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV
CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECEEEEEECCCCCC
>Mature Secondary Structure 
PHSPITAGTKVVYQEGVYTVRAVDGNVLELAYHTGDFFRLVHASSVLVCPPPATQTAAS
CCCCCCCCCEEEEECCEEEEEEECCCEEEEEECCCCEEEEECCCEEEEECCCCCCCHHC
LPAPVAGQGAGTPSAFLAWECVDGPDPLPRWERHCGSRSEVLIGASFALLLDPWGNV
CCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA