| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109902
Identifier: 222109902
GI number: 222109902
Start: 713239
End: 714327
Strand: Direct
Name: 222109902
Synonym: Dtpsy_0686
Alternate gene names: NA
Gene position: 713239-714327 (Clockwise)
Preceding gene: 222109901
Following gene: 222109905
Centisome position: 18.79
GC content: 62.72
Gene sequence:
>1089_bases ATGAGAGGCAACCAAGACTTCCAGGGGGCGATGTTCAGCTACATCAGCCTTGAAGAGCGCGTGCCGCAGGCACACCCGCT GCGCAAGTTGCGCGCGGTGGTTGATGCGCTGCTGGCAACCATGAACCGCGAATTCGAAGCGGTGTACGCCCGCCGTGGCC GCCCATCGGTGCCACCGGAGATGCTGCTCAAGGCCTTGCTGCTGCAGATCCTGTTCTCCATCCGCAGCGAGCGCCAGTTG GTCGAAGCGATCAACTACAACCTGCTGTACCGCTGGTTCGTAGGCCTGAACATCGAAGACAAGGTCTGGGACCACTCCAC TTTCAGCGCCAACCGCGAACGTCTGTTCAACGAAGACCTCGCCCGCACCTTCTTCGAGCGCGTCAAGCTCAGTGCCCAGT GGGGCAAGCTCGCCAGCGACGAGCACTTCAGCGTGGACGGCACGCTCATTGACGCCTGGGCCTCGCACAAGAGCTTCAAG CGCAAAGATGACGACAGCGGCACGCCGCCTGGGCGCAACCCCGAGGTGGACTTCAAGGGGCAGGAGCGCTGCAACGACAC CCACAAGAGCACCACGGACGCCGATGCCCGGCTGTTCAAGAAGAGCCGGGGCGACAAATCCCGCCTGTGCCACATGGGAC ACATCCTCATGGAGAACCGCAACGGGCTGATCGTGGATGTCGAGATCACCCATGCCAGCGGCACGGCCGAGCGCGAGGCG GCACTGGCCATGTTGGAGCGTCGGGGCAACAGGAACAAACGGGCCACGGTCGGTGCCGACAAGGGCTACGACAGCAAGGC CTTCATCAAAGGCTGTCGCAAGCTCAAAGTCACGCCCCACGTGGCGGCCAAGGACAAACACTCGGCGGTGGATGCGCGAG TGACACGGCACGAGGGCTACAAGACCAGCCTGAAGGTGCGCAAGCGCATCGAAGAGGCCTTTGGCTGGATCAAGACCGTC GGTGGTCTGGCAAAGACCAAGCTGATCGGTCAGGCCAAGCTCACGGGCCAGGCGCTGCTGTGCTTTGCCACCTACAACCT TGTGCGAATGGGCAGCATCGGCGGCTGGTGGAACGCGCATCATGCGTGA
Upstream 100 bases:
>100_bases CAGTAAAAATGGCTCTAGCAGGCCGTTGAAAAATCCCCCTCCGACGCCCGCGTTCGCCGCTACGATCTGAAGCCATAGGT GAACGACCCAGACGAGGACG
Downstream 100 bases:
>100_bases GCCCAGGGATACGTGCGCCCGAAATGGGCGGGAGGGCCTGCAAACCGGCCAGATTGGCCGTTGCAATCGCTGCGCAGACG CGTCTGGGCAGCTCATGTCT
Product: transposase is4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; ISGsu3 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase IS4 Family; Transposase Is4 Family Protein; ISPsy22 Transposase Truncated; Transposase Or Inactivated Derivative; Transposase And Inactivated Derivative; Transposase Fragment; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; Acyl-CoA N-Acyltransferase Domain; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; ISGsu2 Transposase; Transposase Is4 Family; Prevent-Host-Death Family Protein; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase; IS5 Family Transposase
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQILFSIRSERQL VEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFK RKDDDSGTPPGRNPEVDFKGQERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILMENRNGLIVDVEITHASGTAEREA ALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPHVAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTV GGLAKTKLIGQAKLTGQALLCFATYNLVRMGSIGGWWNAHHA
Sequences:
>Translated_362_residues MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQILFSIRSERQL VEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFK RKDDDSGTPPGRNPEVDFKGQERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILMENRNGLIVDVEITHASGTAEREA ALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPHVAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTV GGLAKTKLIGQAKLTGQALLCFATYNLVRMGSIGGWWNAHHA >Mature_362_residues MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPEMLLKALLLQILFSIRSERQL VEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDLARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFK RKDDDSGTPPGRNPEVDFKGQERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILMENRNGLIVDVEITHASGTAEREA ALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPHVAAKDKHSAVDARVTRHEGYKTSLKVRKRIEEAFGWIKTV GGLAKTKLIGQAKLTGQALLCFATYNLVRMGSIGGWWNAHHA
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41007; Mature: 41007
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPE CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHH MLLKALLLQILFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHCCCCCCHHHCCCCCCCHHHHHHHHHHH ARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKG HHHHHHHHHHHHHHCCCCCCCCEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC QERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILMENRNGLIVDVEITHASGTAEREA HHHCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEEEEECCCCCHHHHH ALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPHVAAKDKHSAVDARVTRHEGY HHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC KTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRMGSIGGWWNAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCCC HA CC >Mature Secondary Structure MRGNQDFQGAMFSYISLEERVPQAHPLRKLRAVVDALLATMNREFEAVYARRGRPSVPPE CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHH MLLKALLLQILFSIRSERQLVEAINYNLLYRWFVGLNIEDKVWDHSTFSANRERLFNEDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHCCCCCCHHHCCCCCCCHHHHHHHHHHH ARTFFERVKLSAQWGKLASDEHFSVDGTLIDAWASHKSFKRKDDDSGTPPGRNPEVDFKG HHHHHHHHHHHHHHCCCCCCCCEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC QERCNDTHKSTTDADARLFKKSRGDKSRLCHMGHILMENRNGLIVDVEITHASGTAEREA HHHCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEEEEECCCCCHHHHH ALAMLERRGNRNKRATVGADKGYDSKAFIKGCRKLKVTPHVAAKDKHSAVDARVTRHEGY HHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC KTSLKVRKRIEEAFGWIKTVGGLAKTKLIGQAKLTGQALLCFATYNLVRMGSIGGWWNAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCCC HA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA