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The map label for this gene is cycA [H]

Identifier: 222109905

GI number: 222109905

Start: 716300

End: 716938

Strand: Direct

Name: cycA [H]

Synonym: Dtpsy_0690

Alternate gene names: 222109905

Gene position: 716300-716938 (Clockwise)

Preceding gene: 222109902

Following gene: 222109906

Centisome position: 18.87

GC content: 65.88

Gene sequence:

>639_bases
ATGAAGTTGCTCGCCTCCCTGCTGATGGCTGCCGCACTGGCAGTCCCCGCTGCCTCGGCCCTTGCCGCAGGCGAAACCCC
GGCGCCGCAAAAGGCAGCGAAGCCTGATCTCGTGAAGGGCGAGGCCAGCTACGCCGCCGTGTGCGCCGCCTGCCACGCCG
CCGACGGCAATTCCACCATCGCAGCCAACCCCAAGCTGGCGCAGCAGCACCCGGAATACCTGGTCAAGCAGCTGCAGGAG
TTCAAGGCCGGCAAGCGTGCTGACCCCATCATGCAAGGCATGGCCGCCATCCTCTCCGAGGACGACATGCGCAACGTGTC
GTGGTGGCTGGCCTCCAAGCAAGCCAAGGAAGGCTTTGCCAAGGACAAGGATCTGGTCGCCATGGGCGAACGCATCTACC
GCGGCGGCATCCAGGAGCGCAACATTGCCGCCTGCGCCGGCTGCCACAGCCCCAACGGTTCCGGCATTCCCGCCCAGTAC
CCGCGCCTGTCGGGCCAGCATGCCGACTACACGGTCAAGCAGCTGGTGGACTTCCGCGACGGCAAGCGTGGCAACAACGT
GCAGATGCGCGACGTGGCCGCCAAGCTCAACGACCGCGAGATCAAGGCCGTGGCTGACTACATTGCCGGTTTGCGTTGA

Upstream 100 bases:

>100_bases
GTGATGTGGTCGGCATATATGGGTTTTCCAAGGGATAGGGCGAAACAGGGGGCATTGTAGAATCGCGGGGTTTTGCGCTC
ATAACACAAGATCCCCCGAT

Downstream 100 bases:

>100_bases
TTCACGTCAAATTTCCAGGGGTGCTCCGATGCGCCTTTGGAACCTACCGCCGATAATCGCACCCAAGACGGGCGGGCTCA
TCTGAACGGATGGCCCGCCC

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKLLASLLMAAALAVPAASALAAGETPAPQKAAKPDLVKGEASYAAVCAACHAADGNSTIAANPKLAQQHPEYLVKQLQE
FKAGKRADPIMQGMAAILSEDDMRNVSWWLASKQAKEGFAKDKDLVAMGERIYRGGIQERNIAACAGCHSPNGSGIPAQY
PRLSGQHADYTVKQLVDFRDGKRGNNVQMRDVAAKLNDREIKAVADYIAGLR

Sequences:

>Translated_212_residues
MKLLASLLMAAALAVPAASALAAGETPAPQKAAKPDLVKGEASYAAVCAACHAADGNSTIAANPKLAQQHPEYLVKQLQE
FKAGKRADPIMQGMAAILSEDDMRNVSWWLASKQAKEGFAKDKDLVAMGERIYRGGIQERNIAACAGCHSPNGSGIPAQY
PRLSGQHADYTVKQLVDFRDGKRGNNVQMRDVAAKLNDREIKAVADYIAGLR
>Mature_212_residues
MKLLASLLMAAALAVPAASALAAGETPAPQKAAKPDLVKGEASYAAVCAACHAADGNSTIAANPKLAQQHPEYLVKQLQE
FKAGKRADPIMQGMAAILSEDDMRNVSWWLASKQAKEGFAKDKDLVAMGERIYRGGIQERNIAACAGCHSPNGSGIPAQY
PRLSGQHADYTVKQLVDFRDGKRGNNVQMRDVAAKLNDREIKAVADYIAGLR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 22573; Mature: 22573

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLASLLMAAALAVPAASALAAGETPAPQKAAKPDLVKGEASYAAVCAACHAADGNSTI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
AANPKLAQQHPEYLVKQLQEFKAGKRADPIMQGMAAILSEDDMRNVSWWLASKQAKEGFA
ECCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
KDKDLVAMGERIYRGGIQERNIAACAGCHSPNGSGIPAQYPRLSGQHADYTVKQLVDFRD
CCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GKRGNNVQMRDVAAKLNDREIKAVADYIAGLR
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLLASLLMAAALAVPAASALAAGETPAPQKAAKPDLVKGEASYAAVCAACHAADGNSTI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
AANPKLAQQHPEYLVKQLQEFKAGKRADPIMQGMAAILSEDDMRNVSWWLASKQAKEGFA
ECCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
KDKDLVAMGERIYRGGIQERNIAACAGCHSPNGSGIPAQYPRLSGQHADYTVKQLVDFRD
CCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GKRGNNVQMRDVAAKLNDREIKAVADYIAGLR
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7619830; 6089759 [H]