| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109816
Identifier: 222109816
GI number: 222109816
Start: 620472
End: 621155
Strand: Direct
Name: 222109816
Synonym: Dtpsy_0600
Alternate gene names: NA
Gene position: 620472-621155 (Clockwise)
Preceding gene: 222109815
Following gene: 222109817
Centisome position: 16.34
GC content: 67.11
Gene sequence:
>684_bases ATGGGTAATATCGGCAGCTTTTTCCCGTCCTCTTCCTCCTATCCCCTGCGCGTTTGCGGTATGAGTCCCGTCATTGCCTT CCTGCTGTTCACCACGCTGTCGCTTGCGATGGCATCGCCCGCGTCGGCGCAGACGCGCTATTCCTGCCGCGACGAGCAGG GCGCCGTCTACACCCTGGCGCGCCCGTGCCCCAAGGGCATGGTGACCACCGCCGTCTCGGCGGGACCGGTGGAGCCACGC GTCGAGCCCCGCAGCTACGCGCCCACCCCGTCCCGGCGCAGCAGTGCGATGCGCGAGGTGCCGGAATACGAGAGCTACAT GAGCGGGCGCTGCCGCACGCTGCAAAACAGCATCCGCGGGGCATCGGCCAATGGCTCCAGCTACGACGTCATCGCGGGCA TGCAGCGCGAATACCGGCGTGACTGCAGCGACGAGGAGAGCGATGCCGCCTCGCGCTACTACCGCGAGCGCCGCGAGGCA CGCAGCCAGCGCCGCACAGAGCGCGAGCGCGAGGAACAAGCCCAACTGGCGCAGGAGGAGCAGGAAAGCCGCAAGGCGCT GCAATGCGCGGAGTCCAAACGCATCCTGGCCGCCAAGAGAGCGCGCACCGACCTGACACCGGGTGAACGCAATGATCTGC GCCGTTTTGAGACCAACGTCATCACCCGCTGCGGCGACTTCTGA
Upstream 100 bases:
>100_bases CTGCGCCGCGAGGGCGTGCCGGGCCTGCACTTCTACACCATGAACCAGAGCGCGGCCACGTTGGAAATCTGCGACCGCCT GGGGCTCTGAAGCAGCGGGG
Downstream 100 bases:
>100_bases CCCTTTGCAGCCCGGCCGCATGGGACGGTGGTTGGCCGGCGTGCTGTTGGCGGCCGTGCTGGCGGGTTGCGCGGCGCCAC CCGCCGATGCGCCCCCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGNIGSFFPSSSSYPLRVCGMSPVIAFLLFTTLSLAMASPASAQTRYSCRDEQGAVYTLARPCPKGMVTTAVSAGPVEPR VEPRSYAPTPSRRSSAMREVPEYESYMSGRCRTLQNSIRGASANGSSYDVIAGMQREYRRDCSDEESDAASRYYRERREA RSQRRTEREREEQAQLAQEEQESRKALQCAESKRILAAKRARTDLTPGERNDLRRFETNVITRCGDF
Sequences:
>Translated_227_residues MGNIGSFFPSSSSYPLRVCGMSPVIAFLLFTTLSLAMASPASAQTRYSCRDEQGAVYTLARPCPKGMVTTAVSAGPVEPR VEPRSYAPTPSRRSSAMREVPEYESYMSGRCRTLQNSIRGASANGSSYDVIAGMQREYRRDCSDEESDAASRYYRERREA RSQRRTEREREEQAQLAQEEQESRKALQCAESKRILAAKRARTDLTPGERNDLRRFETNVITRCGDF >Mature_226_residues GNIGSFFPSSSSYPLRVCGMSPVIAFLLFTTLSLAMASPASAQTRYSCRDEQGAVYTLARPCPKGMVTTAVSAGPVEPRV EPRSYAPTPSRRSSAMREVPEYESYMSGRCRTLQNSIRGASANGSSYDVIAGMQREYRRDCSDEESDAASRYYRERREAR SQRRTEREREEQAQLAQEEQESRKALQCAESKRILAAKRARTDLTPGERNDLRRFETNVITRCGDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25515; Mature: 25384
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNIGSFFPSSSSYPLRVCGMSPVIAFLLFTTLSLAMASPASAQTRYSCRDEQGAVYTLA CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEC RPCPKGMVTTAVSAGPVEPRVEPRSYAPTPSRRSSAMREVPEYESYMSGRCRTLQNSIRG CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC ASANGSSYDVIAGMQREYRRDCSDEESDAASRYYRERREARSQRRTEREREEQAQLAQEE CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QESRKALQCAESKRILAAKRARTDLTPGERNDLRRFETNVITRCGDF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNIGSFFPSSSSYPLRVCGMSPVIAFLLFTTLSLAMASPASAQTRYSCRDEQGAVYTLA CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEC RPCPKGMVTTAVSAGPVEPRVEPRSYAPTPSRRSSAMREVPEYESYMSGRCRTLQNSIRG CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC ASANGSSYDVIAGMQREYRRDCSDEESDAASRYYRERREARSQRRTEREREEQAQLAQEE CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QESRKALQCAESKRILAAKRARTDLTPGERNDLRRFETNVITRCGDF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA