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The map label for this gene is ruvB [H]

Identifier: 222109716

GI number: 222109716

Start: 517051

End: 518121

Strand: Direct

Name: ruvB [H]

Synonym: Dtpsy_0499

Alternate gene names: 222109716

Gene position: 517051-518121 (Clockwise)

Preceding gene: 222109712

Following gene: 222109726

Centisome position: 13.62

GC content: 69.09

Gene sequence:

>1071_bases
ATGACGATCCATACCGACGACTTTGCCCCCTCTCCCCCTCCGGCGCGCGAGCGCGTGGTGTCGGCCGCGCCGGCCTCCTC
ACAGGAGGAAGCGCTGGAGCGTGCGCTGCGCCCCAAGCTGCTGCAGGAGTACGTGGGCCAGGCCAAGGCGCGCGAACAGC
TCGAGATCTTCATCGGCGCGGCCAAGAAGCGCGGCGAGGCGCTGGACCATGTGCTGCTGTTCGGCCCGCCGGGCTTGGGA
AAAACCACGCTCAGCCACATCATCGCCACCGAACTGGGCGTGAACCTGCGCCAGACCAGCGGCCCCGTGCTGGAAAAGCC
CAAGGATCTGGCAGCGCTGCTCACCAACCTGGAACGCAACGACGTTCTCTTCATCGACGAGATCCACCGCCTTTCGCCCG
TGGTCGAGGAAATCCTCTACCCCGCGCTGGAGGACTACCAGATCGACATCATGATCGGCGAGGGGCCGGCCGCGCGCAGC
ATCAAGCTGGACCTGCAGCCCTTCACGCTGGTGGGCGCCACCACGCGCGCGGGCATGCTCACCAACCCGCTGCGCGACCG
CTTCGGCATCGTTGCGCGGCTGGAGTTCTACACGCCCGAGGAATTGGCGCGCATCGTCATGCGATCGGCCGGCCTGCTGG
GCGCGCCCATCGACGCCGAGGGCGGCATGGAAATCGCGCGCCGCTCGCGCGGCACGCCGCGCATCGCCAACCGCCTGCTG
CGCCGCGTGCGCGACTATGCCGAGGTGAAGGGATCGGGCCACATCACCCTGGACATTGCCAACCGCGCGCTGACCATGCT
GGACGTGGATCCGCAGGGCTTCGACGTGATGGACCGCAAGCTGCTGGAGGCCGTGGTGCATCGCTTCGACGGCGGCCCCG
TGGGACTGGACAACATTGCCGCCAGCATCGGCGAGGAGAGCGGCACCATCGAGGACGTCATCGAGCCCTACCTGATTCAG
CAGGGCTATCTGCAGCGCACCCCGCGCGGGCGCGTGGCCACGCTGGCCGCCTACCGCCACCTGGGCGTGGCGCCGCCGCG
CGCCGCGGGCGGGCTGTTCGAGTCCGCCTGA

Upstream 100 bases:

>100_bases
ACCGAAAGGCGGCTATCCCTGGCCCGCGCGGGGTGGCGGGGCGGCACGGCGGCGCGGGGGAATGGGGGACAATGCACACG
CCCTTCCTGGTCCGCTTCGC

Downstream 100 bases:

>100_bases
TCGCTCAAGCCGCGTGGGGGGTGAGCGGCTGCGTCCGCGCGTCGGCTTGGTGCGCCGCGCCGCGGGTCAGCGCTGTGACC
ATCCCGCTCACGATGAGCAC

Product: holliday junction DNA helicase ruvb

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEYVGQAKAREQLEIFIGAAKKRGEALDHVLLFGPPGLG
KTTLSHIIATELGVNLRQTSGPVLEKPKDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARS
IKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELARIVMRSAGLLGAPIDAEGGMEIARRSRGTPRIANRLL
RRVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIAASIGEESGTIEDVIEPYLIQ
QGYLQRTPRGRVATLAAYRHLGVAPPRAAGGLFESA

Sequences:

>Translated_356_residues
MTIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEYVGQAKAREQLEIFIGAAKKRGEALDHVLLFGPPGLG
KTTLSHIIATELGVNLRQTSGPVLEKPKDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARS
IKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELARIVMRSAGLLGAPIDAEGGMEIARRSRGTPRIANRLL
RRVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIAASIGEESGTIEDVIEPYLIQ
QGYLQRTPRGRVATLAAYRHLGVAPPRAAGGLFESA
>Mature_355_residues
TIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEYVGQAKAREQLEIFIGAAKKRGEALDHVLLFGPPGLGK
TTLSHIIATELGVNLRQTSGPVLEKPKDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSI
KLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELARIVMRSAGLLGAPIDAEGGMEIARRSRGTPRIANRLLR
RVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIAASIGEESGTIEDVIEPYLIQQ
GYLQRTPRGRVATLAAYRHLGVAPPRAAGGLFESA

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=330, Percent_Identity=70.6060606060606, Blast_Score=471, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 38823; Mature: 38692

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEYVGQAKAREQLEIFIGA
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKRGEALDHVLLFGPPGLGKTTLSHIIATELGVNLRQTSGPVLEKPKDLAALLTNLERN
HHHCCHHHCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCC
DVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGML
CEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCHHCCHH
TNPLRDRFGIVARLEFYTPEELARIVMRSAGLLGAPIDAEGGMEIARRSRGTPRIANRLL
HHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH
RRVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIA
HHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ASIGEESGTIEDVIEPYLIQQGYLQRTPRGRVATLAAYRHLGVAPPRAAGGLFESA
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
TIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEYVGQAKAREQLEIFIGA
CCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKRGEALDHVLLFGPPGLGKTTLSHIIATELGVNLRQTSGPVLEKPKDLAALLTNLERN
HHHCCHHHCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCCCC
DVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGML
CEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCHHCCHH
TNPLRDRFGIVARLEFYTPEELARIVMRSAGLLGAPIDAEGGMEIARRSRGTPRIANRLL
HHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH
RRVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIA
HHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ASIGEESGTIEDVIEPYLIQQGYLQRTPRGRVATLAAYRHLGVAPPRAAGGLFESA
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA