| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109726
Identifier: 222109726
GI number: 222109726
Start: 526479
End: 527567
Strand: Direct
Name: 222109726
Synonym: Dtpsy_0510
Alternate gene names: NA
Gene position: 526479-527567 (Clockwise)
Preceding gene: 222109716
Following gene: 222109727
Centisome position: 13.87
GC content: 69.7
Gene sequence:
>1089_bases ATGACGGCTCTCACCCCTTCGCTTTTCGAGCACATCCGCCAGCGCATCACGGCCCAGGGAGGCTGGATCGGCTTCGACCG GTTCATGGCGCTGGCGTTGTACACGCCGGGCCTGGGCTATTACGCGGGCGACCTGCCGAAGTTCGGCGCCATGCCCGCCA GCGGCAGCGACTTCGTGACCGCGCCCGAGCTGTCCCCCGTCTTCGGCAGCGTGCTGGCCCGCCAGGTGCGCGAGGCACTG GATGCCACCGCCACCGACGAGGTCTGGGAGTTTGGCGCCGGCAGCGGCGCGCTGGCCGCCCAGTTGCTGGGCGCGTTGGG CGACCGTGTGCGGCGCTACACCATCGTGGACCTGTCGGGTAGCCTGCGCGCACGCCAGCAGGCCACGCTGGCGGCCTGGG GCGACCGCGTGCACTGGGTCGACCGTCTGCCCGATCAGATACAGGGCGTGGTGGTGGGCAATGAGGTGCTGGACGCCATG CCCGTGCAACTGCTGCAGCGCCGCGCGGGCCTGTGGCACGAACGCGGCGTGGCCCTGGACGAGTCGGGCAACGGCTTTGT GTGGCAAGACCGTCCCACCCCGCTGCGCCCGCCGGTGGAGATCGACGGCCCGCACGACTACCTCACCGAGATCCACCCCC AGGGCGAGGCCTTCATGCGCACGCTGGCCCAGCACCTCGTGCGCGGCGCGGCCTTCCTGATCGACTACGGCTTTGGCGAG GACGAGTACTACCACCCCCAGCGGCACATGGGCACGCTGGTGTGCCACCGCGGGCACCAGGTGGATTCCGACCCGCTGGC GGACGTAGGCCTCAAGGACATCACCGCGCACGTCAACTTCACCGCGATGGCCCTGGCCGCGCAGGACGCGGGGCTGCAGG TGCTGGGCTACACGACGCAGGCGCACTTTCTCATCAACTGCGGTCTGCTATCCGAACTGGAGCGGTTGACGCAGGCCCAG CGGGCCCAAGCGGCCAAATTGATGATGGAGCACGAAATGGGCGAGCTGTTCAAGGTGCTGGCCGTGGGCGCAGGCGAGCC GTGGCGGCCCATGGGCTTTGCGCAGGGTGACCGGAGCCACCGGCTCTGA
Upstream 100 bases:
>100_bases GACTGCAGCCAGCGCACCAATTCGGACGAGGGCTGCAGGGAAGACGAGGCGGAAGAGTCGCTCATGCAAATGGGGAGTAA CGCGGGCTGGACTTGGAATT
Downstream 100 bases:
>100_bases GGTTTCTATAGATGTTTTGGTGTTAAACAACAAAGAAAACAGTATTTTTAGAAATAAAAAGCGACGCCTACAGTGACTGC ACGTCTTCACCCACCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTALTPSLFEHIRQRITAQGGWIGFDRFMALALYTPGLGYYAGDLPKFGAMPASGSDFVTAPELSPVFGSVLARQVREAL DATATDEVWEFGAGSGALAAQLLGALGDRVRRYTIVDLSGSLRARQQATLAAWGDRVHWVDRLPDQIQGVVVGNEVLDAM PVQLLQRRAGLWHERGVALDESGNGFVWQDRPTPLRPPVEIDGPHDYLTEIHPQGEAFMRTLAQHLVRGAAFLIDYGFGE DEYYHPQRHMGTLVCHRGHQVDSDPLADVGLKDITAHVNFTAMALAAQDAGLQVLGYTTQAHFLINCGLLSELERLTQAQ RAQAAKLMMEHEMGELFKVLAVGAGEPWRPMGFAQGDRSHRL
Sequences:
>Translated_362_residues MTALTPSLFEHIRQRITAQGGWIGFDRFMALALYTPGLGYYAGDLPKFGAMPASGSDFVTAPELSPVFGSVLARQVREAL DATATDEVWEFGAGSGALAAQLLGALGDRVRRYTIVDLSGSLRARQQATLAAWGDRVHWVDRLPDQIQGVVVGNEVLDAM PVQLLQRRAGLWHERGVALDESGNGFVWQDRPTPLRPPVEIDGPHDYLTEIHPQGEAFMRTLAQHLVRGAAFLIDYGFGE DEYYHPQRHMGTLVCHRGHQVDSDPLADVGLKDITAHVNFTAMALAAQDAGLQVLGYTTQAHFLINCGLLSELERLTQAQ RAQAAKLMMEHEMGELFKVLAVGAGEPWRPMGFAQGDRSHRL >Mature_361_residues TALTPSLFEHIRQRITAQGGWIGFDRFMALALYTPGLGYYAGDLPKFGAMPASGSDFVTAPELSPVFGSVLARQVREALD ATATDEVWEFGAGSGALAAQLLGALGDRVRRYTIVDLSGSLRARQQATLAAWGDRVHWVDRLPDQIQGVVVGNEVLDAMP VQLLQRRAGLWHERGVALDESGNGFVWQDRPTPLRPPVEIDGPHDYLTEIHPQGEAFMRTLAQHLVRGAAFLIDYGFGED EYYHPQRHMGTLVCHRGHQVDSDPLADVGLKDITAHVNFTAMALAAQDAGLQVLGYTTQAHFLINCGLLSELERLTQAQR AQAAKLMMEHEMGELFKVLAVGAGEPWRPMGFAQGDRSHRL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193211224, Length=382, Percent_Identity=24.6073298429319, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39717; Mature: 39585
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALTPSLFEHIRQRITAQGGWIGFDRFMALALYTPGLGYYAGDLPKFGAMPASGSDFVT CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE APELSPVFGSVLARQVREALDATATDEVWEFGAGSGALAAQLLGALGDRVRRYTIVDLSG CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCC SLRARQQATLAAWGDRVHWVDRLPDQIQGVVVGNEVLDAMPVQLLQRRAGLWHERGVALD CHHHHHHHHHHHHCCCHHHHHHCHHHHCEEEECHHHHHHHHHHHHHHHHCCHHHCCEEEE ESGNGFVWQDRPTPLRPPVEIDGPHDYLTEIHPQGEAFMRTLAQHLVRGAAFLIDYGFGE CCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCC DEYYHPQRHMGTLVCHRGHQVDSDPLADVGLKDITAHVNFTAMALAAQDAGLQVLGYTTQ CCCCCCHHHHHHHHEECCCCCCCCCCHHCCHHHHHHHCCHHHHEEECCCCCEEEEEECEE AHFLINCGLLSELERLTQAQRAQAAKLMMEHEMGELFKVLAVGAGEPWRPMGFAQGDRSH EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RL CC >Mature Secondary Structure TALTPSLFEHIRQRITAQGGWIGFDRFMALALYTPGLGYYAGDLPKFGAMPASGSDFVT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE APELSPVFGSVLARQVREALDATATDEVWEFGAGSGALAAQLLGALGDRVRRYTIVDLSG CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCC SLRARQQATLAAWGDRVHWVDRLPDQIQGVVVGNEVLDAMPVQLLQRRAGLWHERGVALD CHHHHHHHHHHHHCCCHHHHHHCHHHHCEEEECHHHHHHHHHHHHHHHHCCHHHCCEEEE ESGNGFVWQDRPTPLRPPVEIDGPHDYLTEIHPQGEAFMRTLAQHLVRGAAFLIDYGFGE CCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCC DEYYHPQRHMGTLVCHRGHQVDSDPLADVGLKDITAHVNFTAMALAAQDAGLQVLGYTTQ CCCCCCHHHHHHHHEECCCCCCCCCCHHCCHHHHHHHCCHHHHEEECCCCCEEEEEECEE AHFLINCGLLSELERLTQAQRAQAAKLMMEHEMGELFKVLAVGAGEPWRPMGFAQGDRSH EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA