BacMap

Definition	Acidovorax ebreus TPSY chromosome, complete genome.
Accession	NC_011992
Length	3,796,573

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The map label for this gene is dbpA [H]

Identifier: 222109707

GI number: 222109707

Start: 504827

End: 506236

Strand: Direct

Name: dbpA [H]

Synonym: Dtpsy_0489

Alternate gene names: 222109707

Gene position: 504827-506236 (Clockwise)

Preceding gene: 222109706

Following gene: 222109711

Centisome position: 13.3

GC content: 65.53

Gene sequence:

>1410_bases
ATGACTATCTCTTCAGGCGCGTCGCCTGCCCCGTCCGCCACCGCCTTCTCATCGCTGCCTCTGTCCCCTGAAATGCTGGC
CAACCTGCAGCAGCTGGGCTATGCGCAGATGACGCCCATCCAGGCCGCCAGCCTGCCTTTCAGCCTGCAGGGCCGTGATC
TGATCGCCCAGGCCAGCACCGGCAGCGGCAAGACAGCGGCCTTTGGCTTGGCCATGGTCGATCGGCTGAACCCGCGCTGG
TTCGCCGTCCAGGGCCTGGTGCTGTGCCCCACGCGCGAGCTGGCCGATCAGGTGGCCACCGAGATCCGCCGCTTGGCGCG
TGCGCAAGACAACATCAAGGTCGTCACTGTGTATGGGGGCGTGCCTTCGCGCGGCCAGATTGCTTCGCTGGAGAACGGTG
CCCACATCGTGGTGGGCACGCCGGGCCGCGTGATGGACCTGATGGAGCGCGGCAAGCTCGACATCGCCAAACTCAAGACC
TTGGTGCTTGACGAGGCCGACCGCATGCTGGACATGGGCTTCCTGGCCGATATTGAGACCGTGGTGCGCCAGTGTCCGGC
CGAGCGCCAGACCCTGCTGTTCTCCGCCACCTATCCCGACGGCATTGCGGGACTGGCACAGCGTTTCATGCGCGCGCCCC
AGATGGTGAAGGTGGCCGCCCAGCACGGTGCAGGCAAGATCGCGCAGCGCTGGTATGAGGTGGATGCACGCGAGAAGGTC
GACGTGGTGGCGCGCATGCTCGCGCACTTTCGCCCTGCGTCGAGCATTGCCTTCTGCAATACCAAGCAGCAGTGCCGTAA
CGTGGTGACTGCGCTGCAGAGCCAGGGATTCAGTGCCCTCGCCCTGTTTGGCGAGTTGGAGCAGCGCGAGCGTGACGAGG
TGCTGGTGCAGTTTGCCAACAAGAGCTGCAGCGTGCTCGTGGCCACCGACGTGGCGGCGCGCGGCATCGATATTGCCGAC
CTCTCGGCCGTGATCAACGTCGATGTGACGCCCGATCCCGAGGTGCACATCCACCGCATCGGCCGCACGGGCCGCGGCGA
TGCCGAGGGGCTGGCGCTGAACCTGGTCAGCATGGATGAGATGGGCAGCGTGGGCAAGATCGAATTGCTGCAAGGCCGTG
CCTGCGAGTTCTTTCCGGTGGATGAACTCACCCCCACGGCAGGGGGCGAACTGCAGCCACCCATGTGCACCATCCAAATC
ATCGGCGGGCGCAGGGACAAGATCCGCGCCGGCGACGTGATGGGCGCCATGTGCGCCGACTTCGGCTATGCGCGCGAGCA
GATCGGCAAGATCAGCGTCAACGATTTTTCCACCTACGTGGCCGTGGACCGCGCCATCGCGGCCCAGGCCTGCGCCAAGC
TGAATGCCGGCCGCGTCAAAGGCAAGATGGTGAAGGCGCGCTTGCTGTAG

Upstream 100 bases:

>100_bases
GGTGGCCACGGGCCGCTTTGCCGCCGACATGCAGGTGCACCTGGTCAACGACGGGCCGGTGACCCTTCCGCTGCGGATAG
CGCCGGGATAATTGGCGACC

Downstream 100 bases:

>100_bases
CGCGCCTGGGGCCTTGAGGGGCGGGGTTCAGCCCTTTAGGAAGAACAGCCCCGCCATCACCAGCCCCGTGGCCACAATGC
CCCAGCGCAGTACCGGCGCG

Product: dead/deah box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MTISSGASPAPSATAFSSLPLSPEMLANLQQLGYAQMTPIQAASLPFSLQGRDLIAQASTGSGKTAAFGLAMVDRLNPRW
FAVQGLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGGVPSRGQIASLENGAHIVVGTPGRVMDLMERGKLDIAKLKT
LVLDEADRMLDMGFLADIETVVRQCPAERQTLLFSATYPDGIAGLAQRFMRAPQMVKVAAQHGAGKIAQRWYEVDAREKV
DVVARMLAHFRPASSIAFCNTKQQCRNVVTALQSQGFSALALFGELEQRERDEVLVQFANKSCSVLVATDVAARGIDIAD
LSAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDEMGSVGKIELLQGRACEFFPVDELTPTAGGELQPPMCTIQI
IGGRRDKIRAGDVMGAMCADFGYAREQIGKISVNDFSTYVAVDRAIAAQACAKLNAGRVKGKMVKARLL

Sequences:

>Translated_469_residues
MTISSGASPAPSATAFSSLPLSPEMLANLQQLGYAQMTPIQAASLPFSLQGRDLIAQASTGSGKTAAFGLAMVDRLNPRW
FAVQGLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGGVPSRGQIASLENGAHIVVGTPGRVMDLMERGKLDIAKLKT
LVLDEADRMLDMGFLADIETVVRQCPAERQTLLFSATYPDGIAGLAQRFMRAPQMVKVAAQHGAGKIAQRWYEVDAREKV
DVVARMLAHFRPASSIAFCNTKQQCRNVVTALQSQGFSALALFGELEQRERDEVLVQFANKSCSVLVATDVAARGIDIAD
LSAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDEMGSVGKIELLQGRACEFFPVDELTPTAGGELQPPMCTIQI
IGGRRDKIRAGDVMGAMCADFGYAREQIGKISVNDFSTYVAVDRAIAAQACAKLNAGRVKGKMVKARLL
>Mature_468_residues
TISSGASPAPSATAFSSLPLSPEMLANLQQLGYAQMTPIQAASLPFSLQGRDLIAQASTGSGKTAAFGLAMVDRLNPRWF
AVQGLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGGVPSRGQIASLENGAHIVVGTPGRVMDLMERGKLDIAKLKTL
VLDEADRMLDMGFLADIETVVRQCPAERQTLLFSATYPDGIAGLAQRFMRAPQMVKVAAQHGAGKIAQRWYEVDAREKVD
VVARMLAHFRPASSIAFCNTKQQCRNVVTALQSQGFSALALFGELEQRERDEVLVQFANKSCSVLVATDVAARGIDIADL
SAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDEMGSVGKIELLQGRACEFFPVDELTPTAGGELQPPMCTIQII
GGRRDKIRAGDVMGAMCADFGYAREQIGKISVNDFSTYVAVDRAIAAQACAKLNAGRVKGKMVKARLL

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=31.5217391304348, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI45446747, Length=372, Percent_Identity=36.2903225806452, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI45446743, Length=372, Percent_Identity=36.2903225806452, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI4758138, Length=380, Percent_Identity=34.7368421052632, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI148613856, Length=337, Percent_Identity=37.3887240356083, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI38201710, Length=337, Percent_Identity=37.3887240356083, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI262118318, Length=371, Percent_Identity=35.5795148247978, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI262231852, Length=371, Percent_Identity=35.5795148247978, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI13518015, Length=371, Percent_Identity=35.5795148247978, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI216548263, Length=371, Percent_Identity=35.5795148247978, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=36.4583333333333, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=36.5079365079365, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=36.5079365079365, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=36.5079365079365, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=34.0482573726542, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI169881239, Length=382, Percent_Identity=36.3874345549738, Blast_Score=215, Evalue=6e-56,
Organism=Homo sapiens, GI13514809, Length=382, Percent_Identity=36.3874345549738, Blast_Score=215, Evalue=6e-56,
Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=36.4829396325459, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=32.2493224932249, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI41327771, Length=400, Percent_Identity=34, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI41327773, Length=377, Percent_Identity=33.6870026525199, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI13129006, Length=371, Percent_Identity=34.5013477088949, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI224593278, Length=369, Percent_Identity=35.7723577235772, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI4758112, Length=360, Percent_Identity=31.6666666666667, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI18375623, Length=360, Percent_Identity=31.6666666666667, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI222352149, Length=380, Percent_Identity=32.3684210526316, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=34.1025641025641, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI21040371, Length=360, Percent_Identity=31.6666666666667, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI55749865, Length=382, Percent_Identity=29.5811518324607, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=32.7027027027027, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI13514831, Length=381, Percent_Identity=35.4330708661417, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=33.8461538461538, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=33.5180055401662, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=33.3333333333333, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=32.9787234042553, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI256223453, Length=348, Percent_Identity=31.3218390804598, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI164419743, Length=379, Percent_Identity=31.3984168865435, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI51094101, Length=379, Percent_Identity=31.3984168865435, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI62241022, Length=366, Percent_Identity=33.879781420765, Blast_Score=178, Evalue=7e-45,
Organism=Homo sapiens, GI41327776, Length=371, Percent_Identity=30.9973045822102, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI38327634, Length=370, Percent_Identity=32.972972972973, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI41327779, Length=365, Percent_Identity=32.8767123287671, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=31.0945273631841, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI188035877, Length=341, Percent_Identity=31.9648093841642, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=34.3023255813954, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=30.0480769230769, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI4826686, Length=353, Percent_Identity=30.3116147308782, Blast_Score=152, Evalue=9e-37,
Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=27.2479564032698, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=27.5204359673025, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI9966805, Length=330, Percent_Identity=31.8181818181818, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=28.2115869017632, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=34.8623853211009, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI154759257, Length=406, Percent_Identity=27.0935960591133, Blast_Score=107, Evalue=3e-23,
Organism=Escherichia coli, GI1787605, Length=461, Percent_Identity=47.939262472885, Blast_Score=417, Evalue=1e-117,
Organism=Escherichia coli, GI87082221, Length=356, Percent_Identity=42.4157303370786, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1787016, Length=363, Percent_Identity=39.9449035812672, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1790214, Length=387, Percent_Identity=34.625322997416, Blast_Score=216, Evalue=4e-57,
Organism=Escherichia coli, GI1788930, Length=383, Percent_Identity=37.3368146214099, Blast_Score=199, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=35.149863760218, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI17552114, Length=353, Percent_Identity=32.5779036827195, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=33.8753387533875, Blast_Score=221, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=33.8753387533875, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=38.4408602150538, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI115533224, Length=367, Percent_Identity=35.9673024523161, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=384, Percent_Identity=36.1979166666667, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=384, Percent_Identity=36.1979166666667, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=384, Percent_Identity=36.1979166666667, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=34.9462365591398, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=37.5, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=35.5795148247978, Blast_Score=211, Evalue=9e-55,
Organism=Caenorhabditis elegans, GI32565321, Length=399, Percent_Identity=32.8320802005013, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI86570094, Length=398, Percent_Identity=34.6733668341709, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=373, Percent_Identity=36.9973190348526, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71982858, Length=361, Percent_Identity=31.3019390581717, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=33.5078534031414, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=33.8709677419355, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17536099, Length=391, Percent_Identity=32.7365728900256, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=346, Percent_Identity=29.7687861271676, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=391, Percent_Identity=32.7365728900256, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=34.2105263157895, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI71999646, Length=373, Percent_Identity=29.4906166219839, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17507945, Length=397, Percent_Identity=33.5012594458438, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71999644, Length=373, Percent_Identity=29.4906166219839, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=391, Percent_Identity=32.7365728900256, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI115532546, Length=399, Percent_Identity=30.3258145363409, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI115532548, Length=399, Percent_Identity=30.3258145363409, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=30.6282722513089, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17505370, Length=372, Percent_Identity=31.4516129032258, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI193208216, Length=365, Percent_Identity=32.8767123287671, Blast_Score=165, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17553716, Length=352, Percent_Identity=28.125, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71990816, Length=394, Percent_Identity=29.9492385786802, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17507641, Length=395, Percent_Identity=30.6329113924051, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=396, Percent_Identity=29.040404040404, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=210, Percent_Identity=33.8095238095238, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=30.2387267904509, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=28.0748663101604, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=23.9024390243902, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI25148291, Length=329, Percent_Identity=30.3951367781155, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=23.6363636363636, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71997889, Length=369, Percent_Identity=24.6612466124661, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=41.304347826087, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324217, Length=389, Percent_Identity=37.2750642673522, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6325138, Length=377, Percent_Identity=37.6657824933687, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=32.3943661971831, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6324778, Length=364, Percent_Identity=37.3626373626374, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=371, Percent_Identity=36.9272237196765, Blast_Score=216, Evalue=8e-57,
Organism=Saccharomyces cerevisiae, GI6321856, Length=384, Percent_Identity=34.8958333333333, Blast_Score=206, Evalue=8e-54,
Organism=Saccharomyces cerevisiae, GI6324620, Length=360, Percent_Identity=35, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6320224, Length=361, Percent_Identity=31.8559556786704, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=33.9673913043478, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=33.9673913043478, Blast_Score=198, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=364, Percent_Identity=30.7692307692308, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=34.7578347578348, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=33.2417582417582, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=31.5642458100559, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=32.0441988950276, Blast_Score=177, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=425, Percent_Identity=28.4705882352941, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=29.1169451073986, Blast_Score=169, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=29.4270833333333, Blast_Score=166, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6321963, Length=370, Percent_Identity=32.972972972973, Blast_Score=163, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6323306, Length=420, Percent_Identity=25, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6321267, Length=339, Percent_Identity=29.4985250737463, Blast_Score=140, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6320400, Length=388, Percent_Identity=27.0618556701031, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320173, Length=209, Percent_Identity=35.4066985645933, Blast_Score=136, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=24.1379310344828, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6322876, Length=420, Percent_Identity=24.047619047619, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI28574962, Length=370, Percent_Identity=37.2972972972973, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24662330, Length=362, Percent_Identity=37.0165745856354, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI21355075, Length=378, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=8e-58,
Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=34.6883468834688, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24583281, Length=353, Percent_Identity=31.1614730878187, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24583279, Length=353, Percent_Identity=31.1614730878187, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=37.0689655172414, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=31.9148936170213, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=35.5013550135501, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI17985987, Length=381, Percent_Identity=35.1706036745407, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24585582, Length=375, Percent_Identity=34.1333333333333, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17977678, Length=398, Percent_Identity=34.4221105527638, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24642151, Length=369, Percent_Identity=33.8753387533875, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24582080, Length=372, Percent_Identity=34.1397849462366, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24582078, Length=372, Percent_Identity=34.1397849462366, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI17136248, Length=372, Percent_Identity=34.1397849462366, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24582075, Length=372, Percent_Identity=34.1397849462366, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24584994, Length=402, Percent_Identity=32.8358208955224, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI28575014, Length=363, Percent_Identity=31.404958677686, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI281365720, Length=329, Percent_Identity=36.4741641337386, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24581954, Length=361, Percent_Identity=31.8559556786704, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24581952, Length=361, Percent_Identity=31.8559556786704, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24581956, Length=361, Percent_Identity=31.8559556786704, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=34.9862258953168, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI17136814, Length=354, Percent_Identity=34.180790960452, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=29.8630136986301, Blast_Score=165, Evalue=7e-41,
Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=30.8333333333333, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=30.8333333333333, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=32.7027027027027, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=28.8359788359788, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24666101, Length=384, Percent_Identity=29.6875, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24643725, Length=405, Percent_Identity=28.641975308642, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24668515, Length=348, Percent_Identity=28.448275862069, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI19920478, Length=378, Percent_Identity=28.8359788359788, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI20130173, Length=339, Percent_Identity=28.3185840707965, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=32.1266968325792, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=32.1266968325792, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI17136666, Length=420, Percent_Identity=26.9047619047619, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=21.0227272727273, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50357; Mature: 50226

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISSGASPAPSATAFSSLPLSPEMLANLQQLGYAQMTPIQAASLPFSLQGRDLIAQAST
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCEECCCEEEEECCC
GSGKTAAFGLAMVDRLNPRWFAVQGLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGG
CCCCHHHHHHHHHHHCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC
VPSRGQIASLENGAHIVVGTPGRVMDLMERGKLDIAKLKTLVLDEADRMLDMGFLADIET
CCCCCCEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRQCPAERQTLLFSATYPDGIAGLAQRFMRAPQMVKVAAQHGAGKIAQRWYEVDAREKV
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHH
DVVARMLAHFRPASSIAFCNTKQQCRNVVTALQSQGFSALALFGELEQRERDEVLVQFAN
HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
KSCSVLVATDVAARGIDIADLSAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDE
CCCEEEEEECHHHCCCCCEECEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEHHH
MGSVGKIELLQGRACEFFPVDELTPTAGGELQPPMCTIQIIGGRRDKIRAGDVMGAMCAD
CCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
FGYAREQIGKISVNDFSTYVAVDRAIAAQACAKLNAGRVKGKMVKARLL
HHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECC
>Mature Secondary Structure 
TISSGASPAPSATAFSSLPLSPEMLANLQQLGYAQMTPIQAASLPFSLQGRDLIAQAST
CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCEECCCEEEEECCC
GSGKTAAFGLAMVDRLNPRWFAVQGLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGG
CCCCHHHHHHHHHHHCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECC
VPSRGQIASLENGAHIVVGTPGRVMDLMERGKLDIAKLKTLVLDEADRMLDMGFLADIET
CCCCCCEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRQCPAERQTLLFSATYPDGIAGLAQRFMRAPQMVKVAAQHGAGKIAQRWYEVDAREKV
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHH
DVVARMLAHFRPASSIAFCNTKQQCRNVVTALQSQGFSALALFGELEQRERDEVLVQFAN
HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
KSCSVLVATDVAARGIDIADLSAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDE
CCCEEEEEECHHHCCCCCEECEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEHHH
MGSVGKIELLQGRACEFFPVDELTPTAGGELQPPMCTIQIIGGRRDKIRAGDVMGAMCAD
CCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
FGYAREQIGKISVNDFSTYVAVDRAIAAQACAKLNAGRVKGKMVKARLL
HHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]