| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is dtd [H]
Identifier: 222109706
GI number: 222109706
Start: 504356
End: 504817
Strand: Direct
Name: dtd [H]
Synonym: Dtpsy_0488
Alternate gene names: 222109706
Gene position: 504356-504817 (Clockwise)
Preceding gene: 222109705
Following gene: 222109707
Centisome position: 13.28
GC content: 71.43
Gene sequence:
>462_bases ATGATCGGCCTGCTGCAGCGCGTGCGCGAGGCGCGCGTGGAAGTGGCCGGCGAGATCGTGGGCCGCATCGGCCCGGGGCT GCTGGCGCTGGTGTGCGCCGAGCAGGGCGACAGCGAGGCGCAGGCCGACAAGCTGCTGGCCAAAATGCTCAAGCTGCGCA TCTTCAGCGACGAGGCCGGAAAGATGAACCGCAGCGTGCAGGACCTGGACGGGCAGGGCACCTGCGGCGGCCTGCTCATC GTCAGCCAGTTCACCCTGGCCGCCGACACGCGCGGCGGCAACCGGCCCAGCTTCACGCAGGCGGCACCGCCGGCGCAGGG GGAGCGGCTGTACGACTACTTCGTCGCCCAGGCGCGCGCCGTGCACCCCATGGTGGCCACGGGCCGCTTTGCCGCCGACA TGCAGGTGCACCTGGTCAACGACGGGCCGGTGACCCTTCCGCTGCGGATAGCGCCGGGATAA
Upstream 100 bases:
>100_bases AGGCCGTGCCCGGCCTGCGCGCCACCATCGAACTGCTGCCCGAAGGGCAGGCTACGGTGTTCGAGACCGCCGAGGCGGCC GCGCCGGGAGGAGCCGGCAC
Downstream 100 bases:
>100_bases TTGGCGACCATGACTATCTCTTCAGGCGCGTCGCCTGCCCCGTCCGCCACCGCCTTCTCATCGCTGCCTCTGTCCCCTGA AATGCTGGCCAACCTGCAGC
Product: d-tyrosyl-tRNA(tyr) deacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIGLLQRVREARVEVAGEIVGRIGPGLLALVCAEQGDSEAQADKLLAKMLKLRIFSDEAGKMNRSVQDLDGQGTCGGLLI VSQFTLAADTRGGNRPSFTQAAPPAQGERLYDYFVAQARAVHPMVATGRFAADMQVHLVNDGPVTLPLRIAPG
Sequences:
>Translated_153_residues MIGLLQRVREARVEVAGEIVGRIGPGLLALVCAEQGDSEAQADKLLAKMLKLRIFSDEAGKMNRSVQDLDGQGTCGGLLI VSQFTLAADTRGGNRPSFTQAAPPAQGERLYDYFVAQARAVHPMVATGRFAADMQVHLVNDGPVTLPLRIAPG >Mature_153_residues MIGLLQRVREARVEVAGEIVGRIGPGLLALVCAEQGDSEAQADKLLAKMLKLRIFSDEAGKMNRSVQDLDGQGTCGGLLI VSQFTLAADTRGGNRPSFTQAAPPAQGERLYDYFVAQARAVHPMVATGRFAADMQVHLVNDGPVTLPLRIAPG
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]
COG id: COG1490
COG function: function code J; D-Tyr-tRNAtyr deacylase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTD family [H]
Homologues:
Organism=Homo sapiens, GI30795227, Length=157, Percent_Identity=39.4904458598726, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1790320, Length=150, Percent_Identity=54, Blast_Score=154, Evalue=3e-39, Organism=Caenorhabditis elegans, GI115533292, Length=148, Percent_Identity=37.8378378378378, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6319982, Length=147, Percent_Identity=37.4149659863946, Blast_Score=88, Evalue=5e-19, Organism=Drosophila melanogaster, GI281361569, Length=150, Percent_Identity=38.6666666666667, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003732 [H]
Pfam domain/function: PF02580 Tyr_Deacylase [H]
EC number: NA
Molecular weight: Translated: 16269; Mature: 16269
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLLQRVREARVEVAGEIVGRIGPGLLALVCAEQGDSEAQADKLLAKMLKLRIFSDEAG CCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC KMNRSVQDLDGQGTCGGLLIVSQFTLAADTRGGNRPSFTQAAPPAQGERLYDYFVAQARA HHCCCHHCCCCCCCCCCEEEEHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VHPMVATGRFAADMQVHLVNDGPVTLPLRIAPG CCCHHHCCCEECCEEEEEECCCCEEEEEEECCC >Mature Secondary Structure MIGLLQRVREARVEVAGEIVGRIGPGLLALVCAEQGDSEAQADKLLAKMLKLRIFSDEAG CCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC KMNRSVQDLDGQGTCGGLLIVSQFTLAADTRGGNRPSFTQAAPPAQGERLYDYFVAQARA HHCCCHHCCCCCCCCCCEEEEHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VHPMVATGRFAADMQVHLVNDGPVTLPLRIAPG CCCHHHCCCEECCEEEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA