| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222109698
Identifier: 222109698
GI number: 222109698
Start: 494135
End: 494569
Strand: Direct
Name: 222109698
Synonym: Dtpsy_0479
Alternate gene names: NA
Gene position: 494135-494569 (Clockwise)
Preceding gene: 222109697
Following gene: 222109702
Centisome position: 13.02
GC content: 67.36
Gene sequence:
>435_bases ATGAGCCATGGGTTGCTGCGCCGCCATACCCTGGCTGCATTCTGGCTTTGCATGGCCAGCGCGAGTACCCTGGCTGCGGG CCCCCCGCCCCCCGAACGTTTTCGGCTCACGCCCCAGTTGCTGGAGCGTATGGAGGCACTGCAGGCTGCGTCGCCAGAAG CCGCACGTCCCGGCGACGACGACGAGCCGGACGCGCAGTCCGTTCAGGAGCTGGCGCGTCAGCTGGATGCGGATCCGCGC ATCCGTGCCTTGCTGGCCCGCCACCGGGTCAGCAGTATCGAGTACGCCACGGCGGTGTATGCCGCACTGCACGCGGGCAT GTTCCTCGCCATGGAATCGCTGACTGACAAGGCTTCGCGCACCAGCGCGCTGGCATCCTTCACCCCAGAGCAGCGCGCCA ACATCGAGTTGCTGCGCCGGCGGCCAATCAAGTGA
Upstream 100 bases:
>100_bases ATGCGCCTCCCGGCATCTTTGACACGGCATTGAGTGTCATGCGTCCGCACCTGTCGAATGGCGAGTGGGGCAAGCTGGCA CGTGCTTTGGAGCTTGCGCG
Downstream 100 bases:
>100_bases GCGCGCGGCGGCGCGACCTTCAACTGCCGGCCATCTCTTCCAACTGCACAGGAGCGTCCAGCCGCAGCCTCAGCCGCCCA CGGCCGGTCTTGTCGATATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSHGLLRRHTLAAFWLCMASASTLAAGPPPPERFRLTPQLLERMEALQAASPEAARPGDDDEPDAQSVQELARQLDADPR IRALLARHRVSSIEYATAVYAALHAGMFLAMESLTDKASRTSALASFTPEQRANIELLRRRPIK
Sequences:
>Translated_144_residues MSHGLLRRHTLAAFWLCMASASTLAAGPPPPERFRLTPQLLERMEALQAASPEAARPGDDDEPDAQSVQELARQLDADPR IRALLARHRVSSIEYATAVYAALHAGMFLAMESLTDKASRTSALASFTPEQRANIELLRRRPIK >Mature_143_residues SHGLLRRHTLAAFWLCMASASTLAAGPPPPERFRLTPQLLERMEALQAASPEAARPGDDDEPDAQSVQELARQLDADPRI RALLARHRVSSIEYATAVYAALHAGMFLAMESLTDKASRTSALASFTPEQRANIELLRRRPIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15872; Mature: 15741
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHGLLRRHTLAAFWLCMASASTLAAGPPPPERFRLTPQLLERMEALQAASPEAARPGDD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC DEPDAQSVQELARQLDADPRIRALLARHRVSSIEYATAVYAALHAGMFLAMESLTDKASR CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSALASFTPEQRANIELLRRRPIK HHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SHGLLRRHTLAAFWLCMASASTLAAGPPPPERFRLTPQLLERMEALQAASPEAARPGDD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC DEPDAQSVQELARQLDADPRIRALLARHRVSSIEYATAVYAALHAGMFLAMESLTDKASR CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSALASFTPEQRANIELLRRRPIK HHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA