| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109697
Identifier: 222109697
GI number: 222109697
Start: 493419
End: 494138
Strand: Direct
Name: 222109697
Synonym: Dtpsy_0478
Alternate gene names: NA
Gene position: 493419-494138 (Clockwise)
Preceding gene: 222109696
Following gene: 222109698
Centisome position: 13.0
GC content: 64.58
Gene sequence:
>720_bases ATGCAATTCAACCCTCAGGAAATCACCGCGCTCGCGCAGGCCGACGCTGCCGCACCGCGCATGGATATCTATGCCTTCAT CCACAAGGCCTTGCGCGCCTATATGTTCGACACACTCTTGGGCCTGGGTCGTGTGGACGCCGAGGACGACCTCGAACTGT CCCAGGCTGGCGCACGCGTGCTGCAGCTGCTGAGCTTCTGCCGCTCGCACCTGCACCACGAAAACACTTTCGTGCACCCT GCCATGGAGCGCCATGCACCTGGCAGCACCGCCGCAGTTGAGCAGGAGCACGATGGACATGGCCAGGCAATTGCGGCGCT GGCGGATGCGGCGCAGCAGCTCATGCAATGCCCGCGCGAGCGGCGAGCGCGCGTGGCTCACGCGCTGTACCAGCAGCTGG CGCTGTTCGTGGCACACAACTTCGAGCACATGCAGTTGGAGGAGACGGCGCACAACGCGGTGCTCTGGGCGCATTACAGC GACGCGGAACTGGCTGCCATCGAGGGTGCGCTGATCGCGTCGATACCGGCGGACGAGATGCTCGTCACGCTGCGCTGGAT GCTGCCCAGCATGACCCCGAGCGAGCGGGCCATGGTGCTCGGTGACATGCGGCGCAATGCGCCTCCCGGCATCTTTGACA CGGCATTGAGTGTCATGCGTCCGCACCTGTCGAATGGCGAGTGGGGCAAGCTGGCACGTGCTTTGGAGCTTGCGCGATGA
Upstream 100 bases:
>100_bases TGCACCGTTCCTAGACTGCACAGCACCTATGAGACACACGATGTGCCGCATGGGAAGGCGCGGCTCCCAAGCCGCAACAC CACAAGAACCGGAACCGACG
Downstream 100 bases:
>100_bases GCCATGGGTTGCTGCGCCGCCATACCCTGGCTGCATTCTGGCTTTGCATGGCCAGCGCGAGTACCCTGGCTGCGGGCCCC CCGCCCCCCGAACGTTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MQFNPQEITALAQADAAAPRMDIYAFIHKALRAYMFDTLLGLGRVDAEDDLELSQAGARVLQLLSFCRSHLHHENTFVHP AMERHAPGSTAAVEQEHDGHGQAIAALADAAQQLMQCPRERRARVAHALYQQLALFVAHNFEHMQLEETAHNAVLWAHYS DAELAAIEGALIASIPADEMLVTLRWMLPSMTPSERAMVLGDMRRNAPPGIFDTALSVMRPHLSNGEWGKLARALELAR
Sequences:
>Translated_239_residues MQFNPQEITALAQADAAAPRMDIYAFIHKALRAYMFDTLLGLGRVDAEDDLELSQAGARVLQLLSFCRSHLHHENTFVHP AMERHAPGSTAAVEQEHDGHGQAIAALADAAQQLMQCPRERRARVAHALYQQLALFVAHNFEHMQLEETAHNAVLWAHYS DAELAAIEGALIASIPADEMLVTLRWMLPSMTPSERAMVLGDMRRNAPPGIFDTALSVMRPHLSNGEWGKLARALELAR >Mature_239_residues MQFNPQEITALAQADAAAPRMDIYAFIHKALRAYMFDTLLGLGRVDAEDDLELSQAGARVLQLLSFCRSHLHHENTFVHP AMERHAPGSTAAVEQEHDGHGQAIAALADAAQQLMQCPRERRARVAHALYQQLALFVAHNFEHMQLEETAHNAVLWAHYS DAELAAIEGALIASIPADEMLVTLRWMLPSMTPSERAMVLGDMRRNAPPGIFDTALSVMRPHLSNGEWGKLARALELAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26485; Mature: 26485
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFNPQEITALAQADAAAPRMDIYAFIHKALRAYMFDTLLGLGRVDAEDDLELSQAGARV CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LQLLSFCRSHLHHENTFVHPAMERHAPGSTAAVEQEHDGHGQAIAALADAAQQLMQCPRE HHHHHHHHHHHCCCCCEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH RRARVAHALYQQLALFVAHNFEHMQLEETAHNAVLWAHYSDAELAAIEGALIASIPADEM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCHHHHHCCHHHCCCCHHHH LVTLRWMLPSMTPSERAMVLGDMRRNAPPGIFDTALSVMRPHLSNGEWGKLARALELAR HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MQFNPQEITALAQADAAAPRMDIYAFIHKALRAYMFDTLLGLGRVDAEDDLELSQAGARV CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LQLLSFCRSHLHHENTFVHPAMERHAPGSTAAVEQEHDGHGQAIAALADAAQQLMQCPRE HHHHHHHHHHHCCCCCEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHH RRARVAHALYQQLALFVAHNFEHMQLEETAHNAVLWAHYSDAELAAIEGALIASIPADEM HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCHHHHHCCHHHCCCCHHHH LVTLRWMLPSMTPSERAMVLGDMRRNAPPGIFDTALSVMRPHLSNGEWGKLARALELAR HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA