| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109688
Identifier: 222109688
GI number: 222109688
Start: 484488
End: 485159
Strand: Direct
Name: 222109688
Synonym: Dtpsy_0469
Alternate gene names: NA
Gene position: 484488-485159 (Clockwise)
Preceding gene: 222109687
Following gene: 222109696
Centisome position: 12.76
GC content: 68.6
Gene sequence:
>672_bases GTGACAAAACCCGTGCAATCCGAAGCCCCTGCGCGCCGACCCTCCGTGCTCACGCGCTTTGTCCTGTATGCCTTTGGCGC CATGATTGTGCTCACGCTGCTGTGGACCAAGGCCTCGCCATGGCTCTCCTACCCTGTGGCATGGCTCTCCCATGTGGCGC TGGAACAGGCGGCACCCATGTGGGTGCGCGGCGTACACCAGCAGCTGGGCCGCATGGAGGTGGACACCGCGGTGGAGATC GCCGTACCCAACTCCGGCGGGCGCCGGGCCGAAGTCACGCTGGAGGCCGACCCGGGCCGCTACGCCTATGGCCTGCCGAT CTTTGCCGCCCTGCTGGTGGCGGCTTGGGGTGCCGCGCGTGCGCCGGGGCGGGCCTCCCGCGCGGCGCTGGGCTATGTCT TGCTGTTGCCGGCGCAGGCCTTCAGCCTGGTGATGTACCTGCTCATGCAACTGGCGGGCGCGGCGCAGTTCGATGTGCGG GTGCTGCGCGTGGACCAGTGGCAGCTGGAGGCCATCGTCTACGGCTACCAGGTGGGCGTGCTGGTACTGCCCACGCTGGT GCCGGTGCTGGTCTGGCTCTGGCTGGACCGTCAGTTTTTCACCAATGTGATCGTGCGGGGCTGGAAGCAGTCCCTGGCTG CCTCGCCGGCCCCGCAGCGATCGGCTGGCTGA
Upstream 100 bases:
>100_bases ATGCCGCTGGTGATGCCACGCCTGGACAAGGGCCAGGGGCAGGTGAGCACCTCGCTCGACCTGTCGCCGCGCTGAGCCCC AGGCGCAGGAGGATTGCCCC
Downstream 100 bases:
>100_bases CCGTCCTCAGGCGACCAGGGGTGGCTCCTGCATGGCCTCGATCTGCTCATGCAGCATGTCCACTTGGCCGCGCCAGTAGT CGCTGCTGCCGAACCAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTKPVQSEAPARRPSVLTRFVLYAFGAMIVLTLLWTKASPWLSYPVAWLSHVALEQAAPMWVRGVHQQLGRMEVDTAVEI AVPNSGGRRAEVTLEADPGRYAYGLPIFAALLVAAWGAARAPGRASRAALGYVLLLPAQAFSLVMYLLMQLAGAAQFDVR VLRVDQWQLEAIVYGYQVGVLVLPTLVPVLVWLWLDRQFFTNVIVRGWKQSLAASPAPQRSAG
Sequences:
>Translated_223_residues MTKPVQSEAPARRPSVLTRFVLYAFGAMIVLTLLWTKASPWLSYPVAWLSHVALEQAAPMWVRGVHQQLGRMEVDTAVEI AVPNSGGRRAEVTLEADPGRYAYGLPIFAALLVAAWGAARAPGRASRAALGYVLLLPAQAFSLVMYLLMQLAGAAQFDVR VLRVDQWQLEAIVYGYQVGVLVLPTLVPVLVWLWLDRQFFTNVIVRGWKQSLAASPAPQRSAG >Mature_222_residues TKPVQSEAPARRPSVLTRFVLYAFGAMIVLTLLWTKASPWLSYPVAWLSHVALEQAAPMWVRGVHQQLGRMEVDTAVEIA VPNSGGRRAEVTLEADPGRYAYGLPIFAALLVAAWGAARAPGRASRAALGYVLLLPAQAFSLVMYLLMQLAGAAQFDVRV LRVDQWQLEAIVYGYQVGVLVLPTLVPVLVWLWLDRQFFTNVIVRGWKQSLAASPAPQRSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24481; Mature: 24350
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPVQSEAPARRPSVLTRFVLYAFGAMIVLTLLWTKASPWLSYPVAWLSHVALEQAAPM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH WVRGVHQQLGRMEVDTAVEIAVPNSGGRRAEVTLEADPGRYAYGLPIFAALLVAAWGAAR HHHHHHHHHCCEECCCEEEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCC APGRASRAALGYVLLLPAQAFSLVMYLLMQLAGAAQFDVRVLRVDQWQLEAIVYGYQVGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEECHHHHHHHHHHHHHHH LVLPTLVPVLVWLWLDRQFFTNVIVRGWKQSLAASPAPQRSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TKPVQSEAPARRPSVLTRFVLYAFGAMIVLTLLWTKASPWLSYPVAWLSHVALEQAAPM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH WVRGVHQQLGRMEVDTAVEIAVPNSGGRRAEVTLEADPGRYAYGLPIFAALLVAAWGAAR HHHHHHHHHCCEECCCEEEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCC APGRASRAALGYVLLLPAQAFSLVMYLLMQLAGAAQFDVRVLRVDQWQLEAIVYGYQVGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEECHHHHHHHHHHHHHHH LVLPTLVPVLVWLWLDRQFFTNVIVRGWKQSLAASPAPQRSAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA