| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109687
Identifier: 222109687
GI number: 222109687
Start: 483950
End: 484462
Strand: Direct
Name: 222109687
Synonym: Dtpsy_0468
Alternate gene names: NA
Gene position: 483950-484462 (Clockwise)
Preceding gene: 222109686
Following gene: 222109688
Centisome position: 12.75
GC content: 65.89
Gene sequence:
>513_bases TTGCCCTGGACGGCGCTGTTGGCCCGCATCTGCGCAGGGCTGGTCACCTGGTTTGATACCACGGCCGCTGCGCAGGGCAA GGTGCTGTGGAACACCCTCACGGGCTTTGGCGTGTCCATCGAACCGGGGTGCAACGGGATCGAGGCCTGCATCGTCCTGT TCGCGGCCGTGATCGCCTTTCCTTCCTCCTTGCGCCACAAACTGTTCGGGCTGGTCGCAGGCTTTGCTGCGGTGCAGGCG CTGAACGTGGTGCGGGTGATCAGCCTCTTCTACCTGGGCCAGTGGAACACGGCGGTATTCAACTTTGCGCACGAATTCCT GTGGCAGGGGCTCATCATGCTGGATGTGCTGATCGTCTGGCTGCTTTGGGTCCGTGCCGGTGCCAAGGCGCAGCCGCCCC AGGATACGCCGCCACCCGATGAGCCGCCCGCCCCGCCGATGCCGCTGGTGATGCCACGCCTGGACAAGGGCCAGGGGCAG GTGAGCACCTCGCTCGACCTGTCGCCGCGCTGA
Upstream 100 bases:
>100_bases GGTCCAAAGAGGGCTCTGCAGCGTGAGGCTGAGCCTGCTGAGCCCCTGCCGCAGCACCCGATGACAGGCATGTCGGGTCG ATAGCGCTGGCGGTGTCCAG
Downstream 100 bases:
>100_bases GCCCCAGGCGCAGGAGGATTGCCCCGTGACAAAACCCGTGCAATCCGAAGCCCCTGCGCGCCGACCCTCCGTGCTCACGC GCTTTGTCCTGTATGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPWTALLARICAGLVTWFDTTAAAQGKVLWNTLTGFGVSIEPGCNGIEACIVLFAAVIAFPSSLRHKLFGLVAGFAAVQA LNVVRVISLFYLGQWNTAVFNFAHEFLWQGLIMLDVLIVWLLWVRAGAKAQPPQDTPPPDEPPAPPMPLVMPRLDKGQGQ VSTSLDLSPR
Sequences:
>Translated_170_residues MPWTALLARICAGLVTWFDTTAAAQGKVLWNTLTGFGVSIEPGCNGIEACIVLFAAVIAFPSSLRHKLFGLVAGFAAVQA LNVVRVISLFYLGQWNTAVFNFAHEFLWQGLIMLDVLIVWLLWVRAGAKAQPPQDTPPPDEPPAPPMPLVMPRLDKGQGQ VSTSLDLSPR >Mature_169_residues PWTALLARICAGLVTWFDTTAAAQGKVLWNTLTGFGVSIEPGCNGIEACIVLFAAVIAFPSSLRHKLFGLVAGFAAVQAL NVVRVISLFYLGQWNTAVFNFAHEFLWQGLIMLDVLIVWLLWVRAGAKAQPPQDTPPPDEPPAPPMPLVMPRLDKGQGQV STSLDLSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18438; Mature: 18307
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWTALLARICAGLVTWFDTTAAAQGKVLWNTLTGFGVSIEPGCNGIEACIVLFAAVIAF CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHC PSSLRHKLFGLVAGFAAVQALNVVRVISLFYLGQWNTAVFNFAHEFLWQGLIMLDVLIVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLWVRAGAKAQPPQDTPPPDEPPAPPMPLVMPRLDKGQGQVSTSLDLSPR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure PWTALLARICAGLVTWFDTTAAAQGKVLWNTLTGFGVSIEPGCNGIEACIVLFAAVIAF CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHC PSSLRHKLFGLVAGFAAVQALNVVRVISLFYLGQWNTAVFNFAHEFLWQGLIMLDVLIVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLWVRAGAKAQPPQDTPPPDEPPAPPMPLVMPRLDKGQGQVSTSLDLSPR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA