| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222109686
Identifier: 222109686
GI number: 222109686
Start: 482765
End: 483802
Strand: Direct
Name: 222109686
Synonym: Dtpsy_0467
Alternate gene names: NA
Gene position: 482765-483802 (Clockwise)
Preceding gene: 222109685
Following gene: 222109687
Centisome position: 12.72
GC content: 65.22
Gene sequence:
>1038_bases ATGGTGAATATCGAAACCTGCGTTCCGATCAGAAAGGGTTGTGACATGGGAATCAAGACATCGCTGGTTTTTTCTGCCCT GGTGTGGGGCTGTTCGGGGCTGGCCCTGGCCCAGAATGCGGCCGCGCCGCAGGACTATCCGCGCCGGCCCATCACCATGG TGATCCCGGCCGCCGCCGGGGGCGGCACCGACGTGGTAGGCCGCGTGCTGGCCGACGAACTCGGTAAGCGCCTGGGCCAG CCGGTGGTGGTGGACAACAAGAGCGGGGCTTCGGGCATGCTGGGCGCCAATGCGGTCGCGCGTGCGGCGCCTGATGGCTA CACGGTGCTGGTGTCGTACTCCACGCCCGTGTTCTACGCGCACCACATGTTTTCCAAGGTGCCGTACGACATCCGCAAGG ACTTCGAGTTCATCACCCAGATCGCTGCCACCAGCCTGGTGCTGATGGTCAACGCCAACGTGCCCGTCAAGAACATGAAG GAATTCATGGCCTGGGCGCAACAGAACAAGGGCAAGATCAACTACGGCTCGTACGGGACCGGCTCGCCCGGCCACCTGAT GAGCGCCTACCTCAGCGACTCGCGCAAGCTGGAGATGACGCACGTGGCCTACAAGAGCGAGGCGCCGCACATCCAGGACC TGTCTGCGGGCGTGGTCTCCTGGGGCATGGGCACGCTGGCCGCCGCGCAGCCGCAGATCAAGGCCGAGCGCCTGCGCCCG CTGGCGATCCTGGGCCCCCGGCGATTGGCTGATTTGCCCGACGTGCCCACGATGGCCGAGGCGGGCTTTCCCGACCCGGA GTTCAAGACCATCGCCTGGTTCACCATGCTGGCGCCGGCGGGCACGCCCAAGCCCATCCTGGCCCGCCTGGAGAAGGAGG CGGTGCAAATCATCCACTCCACCGCGATGAAGGCCCGCCTGCAGGTCTTCGGCCTGGAAGGGGTGGAAGGCGGGGCCGCA CAGTTCCGCAAGGACTTTGAGGCGTCCAACCCCATCATCGATAAGCTGGTGAAAATATCCGGCGCCAAGCAGGACTGA
Upstream 100 bases:
>100_bases ACCCGGTCCTGCGCAAGCAGGCCGGGTTTTTTTGCGCCACGGCGGTTCCGCGTGTCCCGGTCCACATCAAGGCTATCCCT AATGGTTGTCTGGACCTCAG
Downstream 100 bases:
>100_bases TCGAGGCGCACGGTCCTCGCGCAGTTCGTTGCAGGGTGGGCTAGGCAGGTCCAAAGAGGGCTCTGCAGCGTGAGGCTGAG CCTGCTGAGCCCCTGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MVNIETCVPIRKGCDMGIKTSLVFSALVWGCSGLALAQNAAAPQDYPRRPITMVIPAAAGGGTDVVGRVLADELGKRLGQ PVVVDNKSGASGMLGANAVARAAPDGYTVLVSYSTPVFYAHHMFSKVPYDIRKDFEFITQIAATSLVLMVNANVPVKNMK EFMAWAQQNKGKINYGSYGTGSPGHLMSAYLSDSRKLEMTHVAYKSEAPHIQDLSAGVVSWGMGTLAAAQPQIKAERLRP LAILGPRRLADLPDVPTMAEAGFPDPEFKTIAWFTMLAPAGTPKPILARLEKEAVQIIHSTAMKARLQVFGLEGVEGGAA QFRKDFEASNPIIDKLVKISGAKQD
Sequences:
>Translated_345_residues MVNIETCVPIRKGCDMGIKTSLVFSALVWGCSGLALAQNAAAPQDYPRRPITMVIPAAAGGGTDVVGRVLADELGKRLGQ PVVVDNKSGASGMLGANAVARAAPDGYTVLVSYSTPVFYAHHMFSKVPYDIRKDFEFITQIAATSLVLMVNANVPVKNMK EFMAWAQQNKGKINYGSYGTGSPGHLMSAYLSDSRKLEMTHVAYKSEAPHIQDLSAGVVSWGMGTLAAAQPQIKAERLRP LAILGPRRLADLPDVPTMAEAGFPDPEFKTIAWFTMLAPAGTPKPILARLEKEAVQIIHSTAMKARLQVFGLEGVEGGAA QFRKDFEASNPIIDKLVKISGAKQD >Mature_345_residues MVNIETCVPIRKGCDMGIKTSLVFSALVWGCSGLALAQNAAAPQDYPRRPITMVIPAAAGGGTDVVGRVLADELGKRLGQ PVVVDNKSGASGMLGANAVARAAPDGYTVLVSYSTPVFYAHHMFSKVPYDIRKDFEFITQIAATSLVLMVNANVPVKNMK EFMAWAQQNKGKINYGSYGTGSPGHLMSAYLSDSRKLEMTHVAYKSEAPHIQDLSAGVVSWGMGTLAAAQPQIKAERLRP LAILGPRRLADLPDVPTMAEAGFPDPEFKTIAWFTMLAPAGTPKPILARLEKEAVQIIHSTAMKARLQVFGLEGVEGGAA QFRKDFEASNPIIDKLVKISGAKQD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 36941; Mature: 36941
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNIETCVPIRKGCDMGIKTSLVFSALVWGCSGLALAQNAAAPQDYPRRPITMVIPAAAG CCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEEECCCC GGTDVVGRVLADELGKRLGQPVVVDNKSGASGMLGANAVARAAPDGYTVLVSYSTPVFYA CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCHHHH HHMFSKVPYDIRKDFEFITQIAATSLVLMVNANVPVKNMKEFMAWAQQNKGKINYGSYGT HHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC GSPGHLMSAYLSDSRKLEMTHVAYKSEAPHIQDLSAGVVSWGMGTLAAAQPQIKAERLRP CCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHCCC LAILGPRRLADLPDVPTMAEAGFPDPEFKTIAWFTMLAPAGTPKPILARLEKEAVQIIHS EEEECCHHHCCCCCCCCHHHCCCCCCCCHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHH TAMKARLQVFGLEGVEGGAAQFRKDFEASNPIIDKLVKISGAKQD HHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MVNIETCVPIRKGCDMGIKTSLVFSALVWGCSGLALAQNAAAPQDYPRRPITMVIPAAAG CCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEEECCCC GGTDVVGRVLADELGKRLGQPVVVDNKSGASGMLGANAVARAAPDGYTVLVSYSTPVFYA CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCHHHH HHMFSKVPYDIRKDFEFITQIAATSLVLMVNANVPVKNMKEFMAWAQQNKGKINYGSYGT HHHHHHCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC GSPGHLMSAYLSDSRKLEMTHVAYKSEAPHIQDLSAGVVSWGMGTLAAAQPQIKAERLRP CCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHCCC LAILGPRRLADLPDVPTMAEAGFPDPEFKTIAWFTMLAPAGTPKPILARLEKEAVQIIHS EEEECCHHHCCCCCCCCHHHCCCCCCCCHHEEHHHHHCCCCCCHHHHHHHHHHHHHHHHH TAMKARLQVFGLEGVEGGAAQFRKDFEASNPIIDKLVKISGAKQD HHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]