Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109656

Identifier: 222109656

GI number: 222109656

Start: 448008

End: 448553

Strand: Direct

Name: 222109656

Synonym: Dtpsy_0436

Alternate gene names: NA

Gene position: 448008-448553 (Clockwise)

Preceding gene: 222109655

Following gene: 222109660

Centisome position: 11.8

GC content: 71.25

Gene sequence:

>546_bases
ATGGCCAGCCGTGTGTCCCTGCCCGGTCTGCACACGCCAGGCGCGGGCTTTGACGAGCCGTTCGAGATGCTGGGCGCCTG
CCATGACCGCGTTCGCCGCTCGCTGGACCTGCTGCAGCGCCTGCGCGACTACCTCAAAGCGCACGCCTGCGATGACTCCG
CCCGCCAGGCGGCGCGCGACGTGCTGCGCTATTTCGACATCGCCGCCCCGCTGCACCACGAGGACGAGGAACTCCACGTC
TTCCCGCCCCTGCTGGCCGGTGGCGACGCCGCGCTGACGGACCTGGTGCGCCAGCTGCAGCGGGACCATGTGCTGATGGC
CGAACGCTGGGCTGCCGCGCGCGTGGGGTTGCAGGCGCTGGCCGACGGGGCCGTGCAGGCGTTCACGCCGCAGCACGAGA
CGGCCTTGGACCGGTTTGCGCAGTGCTACGACGATCACCTGCGCCATGAAGACGACCGCATCTATCCCGCCGCGCGCGCG
CTGCTGGACGACCCCGCACAGCAGTCCATGGGGCAGGAGATGGCGCGTCGCCGCGGCGTGCGTTGA

Upstream 100 bases:

>100_bases
AAGGTGCTGCGCCGCATGGTGGAGGCCGTGAAAACGGGCGCTTTCAGCGCCTATCTGCCCTTCAACCGCGACGGCCAGCC
CGTGCGGCTGGGCTGACGCC

Downstream 100 bases:

>100_bases
TTGCTATTGAAATATGAGCTACTACCGCTTGATGGATAAGCGCTAGAGCCATTTTTCATCTGGATCGGACGGGCGGCTGC
GCGCCGCTGTTCGTCAGCGG

Product: hemerythrin hhe cation-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHV
FPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARA
LLDDPAQQSMGQEMARRRGVR

Sequences:

>Translated_181_residues
MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHV
FPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARA
LLDDPAQQSMGQEMARRRGVR
>Mature_180_residues
ASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARDVLRYFDIAAPLHHEDEELHVF
PPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQALADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARAL
LDDPAQQSMGQEMARRRGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 20354; Mature: 20223

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLRYFDIAAPLHHEDEELHVFPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQAL
HHHHHHHHCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARALLDDPAQQSMGQEMARRRGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure 
ASRVSLPGLHTPGAGFDEPFEMLGACHDRVRRSLDLLQRLRDYLKAHACDDSARQAARD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLRYFDIAAPLHHEDEELHVFPPLLAGGDAALTDLVRQLQRDHVLMAERWAAARVGLQAL
HHHHHHHHCCCCCCCCCEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADGAVQAFTPQHETALDRFAQCYDDHLRHEDDRIYPAARALLDDPAQQSMGQEMARRRGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]