Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109601

Identifier: 222109601

GI number: 222109601

Start: 392534

End: 394267

Strand: Direct

Name: 222109601

Synonym: Dtpsy_0381

Alternate gene names: NA

Gene position: 392534-394267 (Clockwise)

Preceding gene: 222109600

Following gene: 222109602

Centisome position: 10.34

GC content: 65.17

Gene sequence:

>1734_bases
ATGAAGATGCAGTTCAAGGCGATCGCGTTCGCCGCCGCGGCGCTGGCGCTGGGGCAGGCAGCCTGGGCCGGCGAGGCCGA
GGCCAAGAAGTGGATCGACAGCGAGTTCCAGCCCTCCACGCTGAGCAAAGACCAGCAGATGGCCGAGATGAAGTGGTTCA
TCGACGCGGCCAAGAAGCTGCAGGCCAAGGGCGTGAAGGAGATCGCGGTGGTCTCCGAGACCATCACCACGCACGAGTAC
GAATCCAAGACCCTGGCCAAGGCGTTCAGCGAGATCACGGGCATCCAGGTCAAGCACGACCTGATCCAAGAGGGCGACGT
GGTCGAGAAGCTGCAGACCTCCATGCAGTCGGGCAAGTCCATCTATGACGGCTGGATCAGCGACTCCGACCTCATCGGCA
CCCACTACCGCTACGGCAAGATCCTGAACCTGTCCGACTACATGGCCGGCCCGGGCAAGGACTACACCAACCCCGGCCTG
GATCTGCAGGACTTCATCGGCACCAAGTTCACCACCGCCCCGGACGGCAAGCTGTACCAGCTGCCCGACCAGCAGTTCGC
CAACCTGTACTGGTTCCGCGCCGACCTGTTCGACCGCAAAGACTTGAAGGACAAGTTCAAGGCCAAGTACGGCTACGACC
TGGGCGTGCCGCTGAACTGGTCTGCCTATGAAGACATCGCCGAGTTCTTCACCAATGACGTGAAGCAGATCGACGGCAAG
CCCATCTACGGCCACATGGACTACGGCAAGAAGGACCCGTCGCTGGGCTGGCGCTTCACCGACGCCTGGCTGTCCATGGC
CGGCAGCGCCGACATCGGCACGCCCAACGGCCTGCCCATCGACGAATGGGGCATCCGCGTGGCCGACGACAAGTGCACCC
CGGTGGGCGCCAGCGTGGCCCGTGGCGGCGCGACCAACTCGCCGGCCGCCGTCTACGCGCTCACCAAGTACGTGGACTGG
ATGAAGAAGTACGCGCCCAAGGAAGCCATGGGCATGACCTTCGGCGAGGCCGGCCCCGTGCCCGCCCAGGGCCAGATCGC
GCAGCAGATCTTCTGGTACACCGCCTTCACCGCCGACATGACCAAACCCGGCCTGCCCGTGGTGAATGCCGACGGCACGC
CCAAGTGGCGCATGGCCCCCGGCCCCAACGGCCCGTACTGGAAGCAGGGCATGCAAAACGGCTACCAGGACGTGGGCAGC
TGGACCTTCTTCAAGGACCACAACCCCGACCGTCTGGCCGCCGCGTGGCTCTACGCCCAGTTCGTGACGGCCAAGAGCAC
GTCGCTGAAGAAGACCGTCGTCGGCCTGACGCCGATCCGCGAGTCCGACATCCGATCCAAGGCCATGACCGACATGGCGC
CCAAGCTGGGCGGCCTGGTCGAGTTCTACCGCAGCCCTGCGCGCGTGGCCTGGTCTCCCACCGGCACCAACGTGCCCGAC
TACCCCAAGCTGGCGCAGCTGTGGTGGAAGAACGTGGCCCAGGCCGTCACGGGCGAGAAGACCCCGCAGGCCGCCATGGA
CACACTGGCTGACGAGATGGACCAGGTGATGGCCCGCCTGCAGCGCGCCGGCATGGAGCGCTGCGCGCCCAAGCTGAACG
CCAAGGGTGACCCGGCCAAGTGGCTGAGCGACCAGCACGCGCCATGGAAGAAGCTCGCCAATGAGAAGCCCAAGGGCGAA
ACCATCAACTACAACACCCTGCTGCAGGCCTGGAAAGACGGCAAGGTGCGTTGA

Upstream 100 bases:

>100_bases
AAGCGCCAGTAGCTCACATTTTTATAAAAGGGGCCAGCCGACTCTCCCCCGGCACCGGCGCCCATCCAACCCCGGGGAGC
GTTCTTGTGAGGAGACAGCA

Downstream 100 bases:

>100_bases
TGCCGCAGCGGATGGGCCCTTTGCCGGGCCCATCCCGCGGATCCGGTCACAATTCAGGGTAAACCCTGATTTTTCTGCCA
GGGTTACGGACCATTCCCCT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MKMQFKAIAFAAAALALGQAAWAGEAEAKKWIDSEFQPSTLSKDQQMAEMKWFIDAAKKLQAKGVKEIAVVSETITTHEY
ESKTLAKAFSEITGIQVKHDLIQEGDVVEKLQTSMQSGKSIYDGWISDSDLIGTHYRYGKILNLSDYMAGPGKDYTNPGL
DLQDFIGTKFTTAPDGKLYQLPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVKQIDGK
PIYGHMDYGKKDPSLGWRFTDAWLSMAGSADIGTPNGLPIDEWGIRVADDKCTPVGASVARGGATNSPAAVYALTKYVDW
MKKYAPKEAMGMTFGEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDVGS
WTFFKDHNPDRLAAAWLYAQFVTAKSTSLKKTVVGLTPIRESDIRSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNVPD
YPKLAQLWWKNVAQAVTGEKTPQAAMDTLADEMDQVMARLQRAGMERCAPKLNAKGDPAKWLSDQHAPWKKLANEKPKGE
TINYNTLLQAWKDGKVR

Sequences:

>Translated_577_residues
MKMQFKAIAFAAAALALGQAAWAGEAEAKKWIDSEFQPSTLSKDQQMAEMKWFIDAAKKLQAKGVKEIAVVSETITTHEY
ESKTLAKAFSEITGIQVKHDLIQEGDVVEKLQTSMQSGKSIYDGWISDSDLIGTHYRYGKILNLSDYMAGPGKDYTNPGL
DLQDFIGTKFTTAPDGKLYQLPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVKQIDGK
PIYGHMDYGKKDPSLGWRFTDAWLSMAGSADIGTPNGLPIDEWGIRVADDKCTPVGASVARGGATNSPAAVYALTKYVDW
MKKYAPKEAMGMTFGEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDVGS
WTFFKDHNPDRLAAAWLYAQFVTAKSTSLKKTVVGLTPIRESDIRSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNVPD
YPKLAQLWWKNVAQAVTGEKTPQAAMDTLADEMDQVMARLQRAGMERCAPKLNAKGDPAKWLSDQHAPWKKLANEKPKGE
TINYNTLLQAWKDGKVR
>Mature_577_residues
MKMQFKAIAFAAAALALGQAAWAGEAEAKKWIDSEFQPSTLSKDQQMAEMKWFIDAAKKLQAKGVKEIAVVSETITTHEY
ESKTLAKAFSEITGIQVKHDLIQEGDVVEKLQTSMQSGKSIYDGWISDSDLIGTHYRYGKILNLSDYMAGPGKDYTNPGL
DLQDFIGTKFTTAPDGKLYQLPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVKQIDGK
PIYGHMDYGKKDPSLGWRFTDAWLSMAGSADIGTPNGLPIDEWGIRVADDKCTPVGASVARGGATNSPAAVYALTKYVDW
MKKYAPKEAMGMTFGEAGPVPAQGQIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDVGS
WTFFKDHNPDRLAAAWLYAQFVTAKSTSLKKTVVGLTPIRESDIRSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNVPD
YPKLAQLWWKNVAQAVTGEKTPQAAMDTLADEMDQVMARLQRAGMERCAPKLNAKGDPAKWLSDQHAPWKKLANEKPKGE
TINYNTLLQAWKDGKVR

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64092; Mature: 64092

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMQFKAIAFAAAALALGQAAWAGEAEAKKWIDSEFQPSTLSKDQQMAEMKWFIDAAKKL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QAKGVKEIAVVSETITTHEYESKTLAKAFSEITGIQVKHDLIQEGDVVEKLQTSMQSGKS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCH
IYDGWISDSDLIGTHYRYGKILNLSDYMAGPGKDYTNPGLDLQDFIGTKFTTAPDGKLYQ
HHHCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE
LPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVKQIDGK
CCCHHHHHEEEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PIYGHMDYGKKDPSLGWRFTDAWLSMAGSADIGTPNGLPIDEWGIRVADDKCTPVGASVA
CEEEECCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHCCCEECCCCCCCCCHHHH
RGGATNSPAAVYALTKYVDWMKKYAPKEAMGMTFGEAGPVPAQGQIAQQIFWYTAFTADM
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
TKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDVGSWTFFKDHNPDRLAAAWLYAQ
CCCCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
FVTAKSTSLKKTVVGLTPIRESDIRSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNVPD
HHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
YPKLAQLWWKNVAQAVTGEKTPQAAMDTLADEMDQVMARLQRAGMERCAPKLNAKGDPAK
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WLSDQHAPWKKLANEKPKGETINYNTLLQAWKDGKVR
HHCCCCCCHHHHCCCCCCCCEECHHHHHHHHCCCCCC
>Mature Secondary Structure
MKMQFKAIAFAAAALALGQAAWAGEAEAKKWIDSEFQPSTLSKDQQMAEMKWFIDAAKKL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QAKGVKEIAVVSETITTHEYESKTLAKAFSEITGIQVKHDLIQEGDVVEKLQTSMQSGKS
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCH
IYDGWISDSDLIGTHYRYGKILNLSDYMAGPGKDYTNPGLDLQDFIGTKFTTAPDGKLYQ
HHHCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE
LPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVKQIDGK
CCCHHHHHEEEEHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PIYGHMDYGKKDPSLGWRFTDAWLSMAGSADIGTPNGLPIDEWGIRVADDKCTPVGASVA
CEEEECCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHCCCEECCCCCCCCCHHHH
RGGATNSPAAVYALTKYVDWMKKYAPKEAMGMTFGEAGPVPAQGQIAQQIFWYTAFTADM
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
TKPGLPVVNADGTPKWRMAPGPNGPYWKQGMQNGYQDVGSWTFFKDHNPDRLAAAWLYAQ
CCCCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
FVTAKSTSLKKTVVGLTPIRESDIRSKAMTDMAPKLGGLVEFYRSPARVAWSPTGTNVPD
HHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
YPKLAQLWWKNVAQAVTGEKTPQAAMDTLADEMDQVMARLQRAGMERCAPKLNAKGDPAK
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WLSDQHAPWKKLANEKPKGETINYNTLLQAWKDGKVR
HHCCCCCCHHHHCCCCCCCCEECHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA