| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109541
Identifier: 222109541
GI number: 222109541
Start: 332421
End: 332882
Strand: Direct
Name: 222109541
Synonym: Dtpsy_0321
Alternate gene names: NA
Gene position: 332421-332882 (Clockwise)
Preceding gene: 222109540
Following gene: 222109542
Centisome position: 8.76
GC content: 60.61
Gene sequence:
>462_bases ATGACCACATCAACTCCCCATCCCTGGGGAACGAATCTGCAAAAAGCCCAGACCTTTCAACCGGATTGGGACAGTTACGT CGTCACGAAGGTCAAGCATGTGCGGGCGGCCTTGCTTTCCGGCATCGACACCTTTAGCGCGGAGGGCTTCACCGTGCCCA TGGCCACCGGCTTCATCGAGCTGACGGGGATGCGCGCCGGATCCTTCCGCACGTTTCTGAAGATCGGGTTTTCCGAGTCC AACCGCGTCATGCTGCCGACGTTCCAACTGGTCGACAACGCGGCGGTGGGAACGCTGATCCTGCCTTCCCCCTGCTTTGG CTCCGCGCTCCAGTTCGTCAACAGTCCCATGGCCCATTTCCGCATCGGCGGCGATGGTCGCCGCAACGCGTTGGCAACGG ACGTCACGCTGTTGAACAGCGCATTGATCGAAGCCGGCGAACCCGAAGGCATGGAAATCTGA
Upstream 100 bases:
>100_bases TCCTACATCCCGTGCGAGGGCATGTCCGCAGGATGAGACGTTTCAAACGTGATCGAACTCTGGTGGATACCGCATCTGGT CCGCACCCATAGGACTACCC
Downstream 100 bases:
>100_bases ACCCCGGCGCACAGCCCGGCGCGCCGTGCGCCCGGTGTCCCCGGCCATTGACGGAGTGATCGCATGAAAGCTCTCACCTA CCAAGGCGCCAAGGACGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTTSTPHPWGTNLQKAQTFQPDWDSYVVTKVKHVRAALLSGIDTFSAEGFTVPMATGFIELTGMRAGSFRTFLKIGFSES NRVMLPTFQLVDNAAVGTLILPSPCFGSALQFVNSPMAHFRIGGDGRRNALATDVTLLNSALIEAGEPEGMEI
Sequences:
>Translated_153_residues MTTSTPHPWGTNLQKAQTFQPDWDSYVVTKVKHVRAALLSGIDTFSAEGFTVPMATGFIELTGMRAGSFRTFLKIGFSES NRVMLPTFQLVDNAAVGTLILPSPCFGSALQFVNSPMAHFRIGGDGRRNALATDVTLLNSALIEAGEPEGMEI >Mature_152_residues TTSTPHPWGTNLQKAQTFQPDWDSYVVTKVKHVRAALLSGIDTFSAEGFTVPMATGFIELTGMRAGSFRTFLKIGFSESN RVMLPTFQLVDNAAVGTLILPSPCFGSALQFVNSPMAHFRIGGDGRRNALATDVTLLNSALIEAGEPEGMEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16510; Mature: 16379
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTPHPWGTNLQKAQTFQPDWDSYVVTKVKHVRAALLSGIDTFSAEGFTVPMATGFIE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEE LTGMRAGSFRTFLKIGFSESNRVMLPTFQLVDNAAVGTLILPSPCFGSALQFVNSPMAHF EECCCCCCEEEEEEECCCCCCEEEEEHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCEE RIGGDGRRNALATDVTLLNSALIEAGEPEGMEI EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTSTPHPWGTNLQKAQTFQPDWDSYVVTKVKHVRAALLSGIDTFSAEGFTVPMATGFIE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEE LTGMRAGSFRTFLKIGFSESNRVMLPTFQLVDNAAVGTLILPSPCFGSALQFVNSPMAHF EECCCCCCEEEEEEECCCCCCEEEEEHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCEE RIGGDGRRNALATDVTLLNSALIEAGEPEGMEI EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA