| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109540
Identifier: 222109540
GI number: 222109540
Start: 331879
End: 332208
Strand: Direct
Name: 222109540
Synonym: Dtpsy_0320
Alternate gene names: NA
Gene position: 331879-332208 (Clockwise)
Preceding gene: 222109539
Following gene: 222109541
Centisome position: 8.74
GC content: 67.58
Gene sequence:
>330_bases ATGGCAAACACCAATCAGGGCAACCAGAACCAAGGCAACCGCAATCAGAGCCAGGGGAGCCGGGACAACAACCAAGGGCA GTCGGGCTCGGGGCGCGGATTTGCCTCGATGGACCCCGACCGCCAGCGCGAGATCGCCGCAGAGGGGGGGCGTGCAGCGC ACGCTTCGGGCAACGCCCACGAGTTCACATCGCAGGAAGCCCGCGCTGCGGGAGCCAAGAGCCATGGCGGTGGGGGCAAC AACGCCTCTTCCGGCTCGGGTAATACCCGGGGCAGCAGCAGCGAGCAGCAGGCGCGCGCCGGCAGCCAGAGCCACAAGAA CGACCGTTGA
Upstream 100 bases:
>100_bases ACGGGTAGTCCCTAGCCTACGGTTGGCCCTTTGCAGTCCCCCGACAGTGAACTTCACACGGCAGTTTCCGTGTGACTTGT TCAACTTACCGGAGATGGAA
Downstream 100 bases:
>100_bases CGTCTGGCACGGGATCGGAGGCCCGCAGTAGGCAGGGCCTTCGATCCAGCCGGTGTCCCGCGCGGGTCGGCACGCGCGCT TGAGCCCCAAGCTGTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MANTNQGNQNQGNRNQSQGSRDNNQGQSGSGRGFASMDPDRQREIAAEGGRAAHASGNAHEFTSQEARAAGAKSHGGGGN NASSGSGNTRGSSSEQQARAGSQSHKNDR
Sequences:
>Translated_109_residues MANTNQGNQNQGNRNQSQGSRDNNQGQSGSGRGFASMDPDRQREIAAEGGRAAHASGNAHEFTSQEARAAGAKSHGGGGN NASSGSGNTRGSSSEQQARAGSQSHKNDR >Mature_108_residues ANTNQGNQNQGNRNQSQGSRDNNQGQSGSGRGFASMDPDRQREIAAEGGRAAHASGNAHEFTSQEARAAGAKSHGGGGNN ASSGSGNTRGSSSEQQARAGSQSHKNDR
Specific function: Unknown
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11126; Mature: 10994
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTNQGNQNQGNRNQSQGSRDNNQGQSGSGRGFASMDPDRQREIAAEGGRAAHASGNAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC EFTSQEARAAGAKSHGGGGNNASSGSGNTRGSSSEQQARAGSQSHKNDR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure ANTNQGNQNQGNRNQSQGSRDNNQGQSGSGRGFASMDPDRQREIAAEGGRAAHASGNAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC EFTSQEARAAGAKSHGGGGNNASSGSGNTRGSSSEQQARAGSQSHKNDR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA