Click here to switch to the map view.

The map label for this gene is 222109483

Identifier: 222109483

GI number: 222109483

Start: 281664

End: 282092

Strand: Direct

Name: 222109483

Synonym: Dtpsy_0263

Alternate gene names: NA

Gene position: 281664-282092 (Clockwise)

Preceding gene: 222109482

Following gene: 222109484

Centisome position: 7.42

GC content: 66.67

Gene sequence:

>429_bases
ATGCTCTGGGTCAAAGCCTTTCACATCGTTTTCGTCGCCAGCTGGTTTGCTGGCCTGTTTTACCTGCCGCGCATCTTCGT
CAACCTGGCCATGGTGGCGCCCGGGTCGGTGGCCGAGCGGGAGCGCCTGCTGCTCATGGCGCGCAAGCTGCTGCGCTTCA
CAACGCTGCTGTCGGTCCCCGCCATCGCGCTGGGCCTGTGGCTGTGGCTGGGCTACGGCATCGGCAAGGGGCCGGGCAAC
GGCTGGCTGCACGCCAAACTGGCCGTGGTGCTGCTGGTGGTGGGCTACCACCACGCCTGCGCCGTACTGCTGCGCAGGCT
GGCTTCCAACGCGGACCAGCACAGCCACCGCTGGTTCCGCTGGTTCAACGAGGTGCCGGTGCTGCTGCTGCTGGTCGCCG
TGGTGTTGGTGGTCGTCAAGCCGTTCTGA

Upstream 100 bases:

>100_bases
GGGGTTTTCCGCCCGGATTTCCGGGCATTTTTTTGCCTCATGGCGGTTCCGTGTCCCGACCGGGTAATGCAGCGCCGGCA
CCGCCACGTACACTGCGCCG

Downstream 100 bases:

>100_bases
GATGCAGCGGCTGCAGCGTTGCCCGGCTTCGTTCCCTCGCAATGGGGGCGGCGCGCGGCGGGCGGCAGCGGCCACGGCAC
GAGGTGGTTGAGAGGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVAPGSVAERERLLLMARKLLRFTTLLSVPAIALGLWLWLGYGIGKGPGN
GWLHAKLAVVLLVVGYHHACAVLLRRLASNADQHSHRWFRWFNEVPVLLLLVAVVLVVVKPF

Sequences:

>Translated_142_residues
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVAPGSVAERERLLLMARKLLRFTTLLSVPAIALGLWLWLGYGIGKGPGN
GWLHAKLAVVLLVVGYHHACAVLLRRLASNADQHSHRWFRWFNEVPVLLLLVAVVLVVVKPF
>Mature_142_residues
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVAPGSVAERERLLLMARKLLRFTTLLSVPAIALGLWLWLGYGIGKGPGN
GWLHAKLAVVLLVVGYHHACAVLLRRLASNADQHSHRWFRWFNEVPVLLLLVAVVLVVVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16008; Mature: 16008

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVAPGSVAERERLLLMARKLLRFTTLLSVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIALGLWLWLGYGIGKGPGNGWLHAKLAVVLLVVGYHHACAVLLRRLASNADQHSHRWFR
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WFNEVPVLLLLVAVVLVVVKPF
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWVKAFHIVFVASWFAGLFYLPRIFVNLAMVAPGSVAERERLLLMARKLLRFTTLLSVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIALGLWLWLGYGIGKGPGNGWLHAKLAVVLLVVGYHHACAVLLRRLASNADQHSHRWFR
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
WFNEVPVLLLLVAVVLVVVKPF
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]