Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109482

Identifier: 222109482

GI number: 222109482

Start: 280741

End: 281454

Strand: Direct

Name: 222109482

Synonym: Dtpsy_0262

Alternate gene names: NA

Gene position: 280741-281454 (Clockwise)

Preceding gene: 222109475

Following gene: 222109483

Centisome position: 7.39

GC content: 73.67

Gene sequence:

>714_bases
ATGCAAACCGCAGTGACGCGGCCCTATTGGCGCGTGTGGACCTACGAAACGCCCGCGGTGGTGCTGGGCTGCTCGCAGCG
CGCCTATCTGGACGGGGCACGCGCGCGCCTGGCGCCCGGCATGGAGTTGTTGCAGCGCCCCTCGGGCGGCGGTGCGGTGC
TGTGCGGCCCGTGGATGGTGAGTTGTTCGGTGGTGCTGCCGCCATCGCACCCCTGGGTGCAGGGCCGCCTGCCCGACAGC
TACCAGGGGCTGGGCCAACTGCATGCGCAGGTACTGGCCCCGTGGGGCGTGGCGGCGCGGGCGTTGCCGCCCGATCAGGT
TGCCGCTGCCAACGCCCGCGGTGGGCCGGTGGTGCCCTGGGCCTGCTACAGCAGCCTTGCACCGTGGGAAGTGGTGGACG
CGGCCGGACGCAAGCTGGTCGGCCTGGCCCAGCGGCGCCAGCGCGCCGGCGTGCTGCTGGTGGCGGGCACCCTGGTCACG
CCCCCGGACTGGGCGTTGCTGTGCCAGGCGCTGGACCAGCAGGGCGACGAAGCTGCACTGCGCGCGCGCACCGTTTCGTG
CGCCGAACTCAGTGCCCGTGCGCCGGATGCGCAGCAGATGGCCAGCGCCTTGCGCGTGGCGCTGACACAGACGCTGGGTG
AAGAAGCGGGCGACGGCGCGGGCGAGGCGGCGGACGACTCCGCGCGCCAGGCAACGGCGCCGAACCGTCCCTAG

Upstream 100 bases:

>100_bases
CCTGCCCGTGGCCGCTGGTGGTAGCCTGTGCCACTTGCCATCTCGCCAGGAGTGCGCCATCACCACCGCAGCACAGGAGC
ACCGCTGGAACCAGCGGTAC

Downstream 100 bases:

>100_bases
CGGACGCTCCATCTTGCGCACCCTGGCGGTGGGTGCTAGATTGGCCCTGGGCGGCCCCTCCGCCCCCCGCTTCACCTCCC
TGAGCGGGCCCCGCTGCCTG

Product: biotin/lipoate a/b protein ligase

Products: NA

Alternate protein names: Lipoate Protein Ligase

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDS
YQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT
PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP

Sequences:

>Translated_237_residues
MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDS
YQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT
PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP
>Mature_237_residues
MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDS
YQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT
PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24905; Mature: 24905

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMV
CCCCCCCCEEEEEEECCCEEEEECCCHHHHCCHHHHHCCCHHHHHCCCCCCEEEECCEEE
SCSVVLPPSHPWVQGRLPDSYQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPW
EEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCCCCCCH
ACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVTPPDWALLCQALDQQGDEAAL
HHHCCCCCHHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
RARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMV
CCCCCCCCEEEEEEECCCEEEEECCCHHHHCCHHHHHCCCHHHHHCCCCCCEEEECCEEE
SCSVVLPPSHPWVQGRLPDSYQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPW
EEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCCCCCCH
ACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVTPPDWALLCQALDQQGDEAAL
HHHCCCCCHHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
RARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA