| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109482
Identifier: 222109482
GI number: 222109482
Start: 280741
End: 281454
Strand: Direct
Name: 222109482
Synonym: Dtpsy_0262
Alternate gene names: NA
Gene position: 280741-281454 (Clockwise)
Preceding gene: 222109475
Following gene: 222109483
Centisome position: 7.39
GC content: 73.67
Gene sequence:
>714_bases ATGCAAACCGCAGTGACGCGGCCCTATTGGCGCGTGTGGACCTACGAAACGCCCGCGGTGGTGCTGGGCTGCTCGCAGCG CGCCTATCTGGACGGGGCACGCGCGCGCCTGGCGCCCGGCATGGAGTTGTTGCAGCGCCCCTCGGGCGGCGGTGCGGTGC TGTGCGGCCCGTGGATGGTGAGTTGTTCGGTGGTGCTGCCGCCATCGCACCCCTGGGTGCAGGGCCGCCTGCCCGACAGC TACCAGGGGCTGGGCCAACTGCATGCGCAGGTACTGGCCCCGTGGGGCGTGGCGGCGCGGGCGTTGCCGCCCGATCAGGT TGCCGCTGCCAACGCCCGCGGTGGGCCGGTGGTGCCCTGGGCCTGCTACAGCAGCCTTGCACCGTGGGAAGTGGTGGACG CGGCCGGACGCAAGCTGGTCGGCCTGGCCCAGCGGCGCCAGCGCGCCGGCGTGCTGCTGGTGGCGGGCACCCTGGTCACG CCCCCGGACTGGGCGTTGCTGTGCCAGGCGCTGGACCAGCAGGGCGACGAAGCTGCACTGCGCGCGCGCACCGTTTCGTG CGCCGAACTCAGTGCCCGTGCGCCGGATGCGCAGCAGATGGCCAGCGCCTTGCGCGTGGCGCTGACACAGACGCTGGGTG AAGAAGCGGGCGACGGCGCGGGCGAGGCGGCGGACGACTCCGCGCGCCAGGCAACGGCGCCGAACCGTCCCTAG
Upstream 100 bases:
>100_bases CCTGCCCGTGGCCGCTGGTGGTAGCCTGTGCCACTTGCCATCTCGCCAGGAGTGCGCCATCACCACCGCAGCACAGGAGC ACCGCTGGAACCAGCGGTAC
Downstream 100 bases:
>100_bases CGGACGCTCCATCTTGCGCACCCTGGCGGTGGGTGCTAGATTGGCCCTGGGCGGCCCCTCCGCCCCCCGCTTCACCTCCC TGAGCGGGCCCCGCTGCCTG
Product: biotin/lipoate a/b protein ligase
Products: NA
Alternate protein names: Lipoate Protein Ligase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDS YQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP
Sequences:
>Translated_237_residues MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDS YQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP >Mature_237_residues MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMVSCSVVLPPSHPWVQGRLPDS YQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPWACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVT PPDWALLCQALDQQGDEAALRARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24905; Mature: 24905
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMV CCCCCCCCEEEEEEECCCEEEEECCCHHHHCCHHHHHCCCHHHHHCCCCCCEEEECCEEE SCSVVLPPSHPWVQGRLPDSYQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPW EEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCCCCCCH ACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVTPPDWALLCQALDQQGDEAAL HHHCCCCCHHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHH RARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MQTAVTRPYWRVWTYETPAVVLGCSQRAYLDGARARLAPGMELLQRPSGGGAVLCGPWMV CCCCCCCCEEEEEEECCCEEEEECCCHHHHCCHHHHHCCCHHHHHCCCCCCEEEECCEEE SCSVVLPPSHPWVQGRLPDSYQGLGQLHAQVLAPWGVAARALPPDQVAAANARGGPVVPW EEEEEECCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCCCCCCH ACYSSLAPWEVVDAAGRKLVGLAQRRQRAGVLLVAGTLVTPPDWALLCQALDQQGDEAAL HHHCCCCCHHHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHH RARTVSCAELSARAPDAQQMASALRVALTQTLGEEAGDGAGEAADDSARQATAPNRP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA