Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is catB1 [H]

Identifier: 222109379

GI number: 222109379

Start: 176722

End: 177924

Strand: Direct

Name: catB1 [H]

Synonym: Dtpsy_0158

Alternate gene names: 222109379

Gene position: 176722-177924 (Clockwise)

Preceding gene: 222109377

Following gene: 222109380

Centisome position: 4.65

GC content: 70.99

Gene sequence:

>1203_bases
ATGACGACTTCTCCTTCCGCTTCCGTGCTGCGCATCGAACGCATCCAGGCACGCATCCTGGACATCCCCACGATCCGCCC
GCACAAGCTCTCGTTCGGCGCCATCCAGCGCCAGAGCCCCGTGATCGTGCAGCTGTGGCTGAGCGATGGCGCCAGCGGCT
TCGGCGAGGCCGCGACCATCGGCGGCCCCTCGTGGAACGAGGAATCGCCCGAGAGCATCCGGCATGCCATCGACAGCTAC
CTCGCGCCTGCCGTGATCGGCCAGGACGCGGGCCGCTTCGAGCAGTTGCTGCAGCGCATGGACCTGGCCTGCAAGGGCAA
CCGCTTTGCCAAGAGCGCCGTGGAGCAGGCCGCCATCGACGCCGTGGCGCGCAGCCTGGGCCTGCCCGTGTGGCAACTGC
TGGGCGGCAAGCAGCGCGAGAGCCTGCCCCTGGCCTGGACGCTGGCCAGCGGCGACTCCGCCAAGGACATCGAGGAGGCC
GAGAAGATGCTGGCCGCGCGCCGCCACCGCATCTTCAAGCTGAAGATCGGCGCACGCGCGCCACAGGAGGACGTGGCGCA
CGTGGCACGCATCGCCCGCGCGCTGGACGGCCGCGCCAGCATGACGGTGGACGTGAACCAGGCCTGGGACGGCGCCACCG
CGCGCCGCTACCTGCCCGAGATGATCGACGCCGGTGTGGGTCTGATCGAGCAGCCCGTGGCCCAGTGGAACGAGGAGGCG
CTGCGCCAGCTCACCGCCACGCTGCCCCACACCGCGCTGGTGATGGCCGACGAGACCGTCTGCACGCCGCAGGACGCGAT
GCGCCTGGCGCGCCATAACGCCTGCCATGTGTTCTCGCTCAAGATCGCCAAGCACGGCGGCCTGCTGCGCACGCGCGCCG
TGGCCGACGTGGCGCGCGCCGCCGACATCGGCTGGTACGGCGGCACGATGCTGGAGACCTCCGTCGGCAGCGCCGCCTCG
GCCCATGTGTTTGCCACGCTGGGCGGCACGCACCACAACTGCGAGCTGTTCGGCCCGCAGCTGCTGGTAGACGACATCGT
GGAGCAGCAGATGGTCCTTTCCGACTTCGCGCTGCAGTTGCCCGACGGGCCGGGCTTCGGCCTCACCGTGGTGCCCGAGC
GGCTCGACCGCTTCGACCGTGCACGCCAGGGCCTCACGCCCGTGCACGTGGACCTGGGCCGCGCCAGCGCGCAGCCCGCC
TGA

Upstream 100 bases:

>100_bases
TGGCGTCGAACAAAAACTGCAATATATCTCATTGGATTCGCCCCGATGCCAGCGCTAAGGTCATGGCCCGTAACGCTTTT
TTCGCCACGGCCCGCTTTCC

Downstream 100 bases:

>100_bases
ACCCTTTTTTTTGCCAGGAGAAACCCAGATGCTGTTCCTCGTTCGCATGGATGTGAAGATTCCCCACGACCTGCCCGCCG
CGCAGGCCGACGAAATCAAG

Product: muconate and chloromuconate cycloisomerase

Products: NA

Alternate protein names: Cis,cis-muconate lactonizing enzyme I 1; MLE 1; Muconate cycloisomerase I 1 [H]

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSY
LAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEA
EKMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA
LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAAS
AHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA

Sequences:

>Translated_400_residues
MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSY
LAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEA
EKMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA
LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAAS
AHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA
>Mature_399_residues
TTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATIGGPSWNEESPESIRHAIDSYL
APAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAIDAVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEAE
KMLAARRHRIFKLKIGARAPQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEAL
RQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARAADIGWYGGTMLETSVGSAASA
HVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQLPDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA

Specific function: Catalyzes a syn cycloisomerization [H]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013370
- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =5.5.1.1 [H]

Molecular weight: Translated: 43206; Mature: 43075

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00908 MR_MLE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATI
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCC
GGPSWNEESPESIRHAIDSYLAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAID
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
AVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEAEKMLAARRHRIFKLKIGARA
HHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEECCCC
PQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA
CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARA
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHHHHH
ADIGWYGGTMLETSVGSAASAHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQL
HCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCC
PDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA
CCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TTSPSASVLRIERIQARILDIPTIRPHKLSFGAIQRQSPVIVQLWLSDGASGFGEAATI
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCCCCC
GGPSWNEESPESIRHAIDSYLAPAVIGQDAGRFEQLLQRMDLACKGNRFAKSAVEQAAID
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
AVARSLGLPVWQLLGGKQRESLPLAWTLASGDSAKDIEEAEKMLAARRHRIFKLKIGARA
HHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEECCCC
PQEDVAHVARIARALDGRASMTVDVNQAWDGATARRYLPEMIDAGVGLIEQPVAQWNEEA
CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LRQLTATLPHTALVMADETVCTPQDAMRLARHNACHVFSLKIAKHGGLLRTRAVADVARA
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHHHHH
ADIGWYGGTMLETSVGSAASAHVFATLGGTHHNCELFGPQLLVDDIVEQQMVLSDFALQL
HCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCC
PDGPGFGLTVVPERLDRFDRARQGLTPVHVDLGRASAQPA
CCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9473520; 9260969 [H]