Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is gltJ [H]

Identifier: 222102913

GI number: 222102913

Start: 598067

End: 598774

Strand: Direct

Name: gltJ [H]

Synonym: Avi_7663

Alternate gene names: 222102913

Gene position: 598067-598774 (Clockwise)

Preceding gene: 222102912

Following gene: 222102914

Centisome position: 94.66

GC content: 54.52

Gene sequence:

>708_bases
TTGAAGGGGTTCGATCTCTCAGCAATTCTTGGCAATCCAGACTATGTCTCCATGCTGCTGCACGGCATAGAGATGACCTT
CATTATCGCCATTGGCTCATGGGTTTTGGCGATGACACTTGCGGTTTTACTGCTGGCGCTGCGGTTTTCGCCGGGCGGTA
TCGGCAATGCCATTGTCACGGCCTATGTTTCCTATCACCGCAATGTGCCAACGCTTGTGCAGCTGGTGCTGTGGTATTTT
GGCATTTTCACCCTGATGCCCAGCGGCCTCAGCGCATGGCTGGTCAATCACAATGCCGAAACCATCTTTGCGGTTATCGG
TCTTGGCCTGTGTCAGGCCGCTTACTTCAGCGAAGACCTGCGCTCAGGCCTGCGCTCCATCAGCCCAGGCCAGATGGAAG
CGGCCCGCGCCTTGGGCCACGGCTATCTCTCGGCCATGCGTTACGTGATGATTCCGCAAGGGGTGCGCAATGCACTGCCA
CCGCTGATCAATCATACGGTATCGCTGTTTAAAAACAGCAGTCTTGCGATTGTTGTTGGTGCGTCAGAGCTTACCCATGC
CGTGAAGGAAATCGAAAACATCACCTTCAGAACATTTGAGAGCTATCTGATTGGCACGGTGCTGTATCTGTTCTTTTCTC
TGCTGATCATGGCAGGCGGCGCGTATCTGCAGTGGCGCGTTGATCATGCAAGGGGTGTGCGGGCATGA

Upstream 100 bases:

>100_bases
TTGCCGCACCCATTGCCGTTAACATCGGCCATATGGAAATCACCCCCACCCTACAAGTGATGGGCGGATTGCAGACGGCC
AAGCCGGAGGAGCGGAAGCC

Downstream 100 bases:

>100_bases
TCCACGACATCATCAAGATTGTGCAGGACTATTGGTTGCTGTTGTTGATCGGCCAATATCCCAATGGCCCGCTCGGTGGC
CTTGCCAACACGCTGATCCT

Product: ABC transporter membrane spanning protein (amino acid)

Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQLVLWYF
GIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALP
PLINHTVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA

Sequences:

>Translated_235_residues
MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQLVLWYF
GIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALP
PLINHTVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA
>Mature_235_residues
MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQLVLWYF
GIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALP
PLINHTVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA

Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=28.8990825688073, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788226, Length=202, Percent_Identity=32.6732673267327, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=29.6296296296296, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=32.093023255814, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87082239, Length=213, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788646, Length=201, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788645, Length=198, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787087, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994930, Length=112, Percent_Identity=33.0357142857143, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25684; Mature: 25684

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVT
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AYVSYHRNVPTLVQLVLWYFGIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDL
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINHTVSLFKNSSLAIVVG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCEEEEEC
ASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MKGFDLSAILGNPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVT
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AYVSYHRNVPTLVQLVLWYFGIFTLMPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDL
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
RSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINHTVSLFKNSSLAIVVG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCEEEEEC
ASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRVDHARGVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamate [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]