| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102857
Identifier: 222102857
GI number: 222102857
Start: 534339
End: 535175
Strand: Reverse
Name: 222102857
Synonym: Avi_7589
Alternate gene names: NA
Gene position: 535175-534339 (Counterclockwise)
Preceding gene: 222102858
Following gene: 222102856
Centisome position: 84.71
GC content: 55.79
Gene sequence:
>837_bases ATGAAAATAGCGATATTGGCCGATCCTCACATCGGCTCTCAAAACGACGTATTCGTCGAAAACTGGAAGGCGGTTGTTAA AACCGTCAACGGCTATGAGGATGTGGAACTGGCAATTGTTCTCGGCGATCTGACGCTGGATGGTGCAAATATTGAGGCAG ATCTGGCATTCGGTGCCGCACAGCTTAAGGCGATTAATGCCCCGGTTCTCGTCCTGCCGGGCAATCACGATATTGGCGAT ATCGCCCGCGACAGCACCCAACCCGCTGACGACGCGCGTCTGGCGGCCTGGGAGACGCATTTTGGCGCTTGGTATTGGCA GTGCGATGCCGTCGAAGGCTGGAGGCTGATCGGCCTGAACAGCCAGATTATCGGCTCAGGCCTGCCTGCCGAGGAGCAAC AATGGTCTGCCCTGGAAAATATGCTGAAGGAGCGGGGTGATCGCAAACCGGTGTTGTTCCTCCACATGCCTCTGTTCCTT GAAGACTGGAACGAAGGTGACAGACCGGCCTGGGCCCTCAAGACCGAAGGTCGGTTGCGGCTGCAACGGCTGATCATGGA GCACGGCGTGTTTGCGGTGGTATCAGGACATATGCATCGCACGCTGCATCTGCAGCAGAAGAATGAGCCAGTACTGATCT GGACACCTGCTTCCAGCTTTCTGGCCCGCGACGAGTCCATGCCAAGCCAGCCGGGAAAAGAACTGCTGGGCGTGACACTG CTGGACTTCGGCAAGGATGATATCTCGGTCGAATTCATTGATATCGACGGGCTGATGAAGAGCTATATCGAAGATTACAA CGGCTCGATTTATCGCTCGCCTGCGAAAACGGCCTGA
Upstream 100 bases:
>100_bases GTAATGCAAGTCGGGCGCACCCCTTGGTGCGCCCGACCCCGCCCTGCGGTGCTCCGCGCCTTGAGCGGCAGGTACAGATG GAAGCTTCCAAGGAAAGATA
Downstream 100 bases:
>100_bases GGACAAGCTATGACCTGGTTTAGTTATCACGGTGGCCATAGCGGGCAGTTCTGCGACCATGCGAAATCCACTCTTGCCGA CGTGATCGAGACGGCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Purple Acid Phosphatase
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKIAILADPHIGSQNDVFVENWKAVVKTVNGYEDVELAIVLGDLTLDGANIEADLAFGAAQLKAINAPVLVLPGNHDIGD IARDSTQPADDARLAAWETHFGAWYWQCDAVEGWRLIGLNSQIIGSGLPAEEQQWSALENMLKERGDRKPVLFLHMPLFL EDWNEGDRPAWALKTEGRLRLQRLIMEHGVFAVVSGHMHRTLHLQQKNEPVLIWTPASSFLARDESMPSQPGKELLGVTL LDFGKDDISVEFIDIDGLMKSYIEDYNGSIYRSPAKTA
Sequences:
>Translated_278_residues MKIAILADPHIGSQNDVFVENWKAVVKTVNGYEDVELAIVLGDLTLDGANIEADLAFGAAQLKAINAPVLVLPGNHDIGD IARDSTQPADDARLAAWETHFGAWYWQCDAVEGWRLIGLNSQIIGSGLPAEEQQWSALENMLKERGDRKPVLFLHMPLFL EDWNEGDRPAWALKTEGRLRLQRLIMEHGVFAVVSGHMHRTLHLQQKNEPVLIWTPASSFLARDESMPSQPGKELLGVTL LDFGKDDISVEFIDIDGLMKSYIEDYNGSIYRSPAKTA >Mature_278_residues MKIAILADPHIGSQNDVFVENWKAVVKTVNGYEDVELAIVLGDLTLDGANIEADLAFGAAQLKAINAPVLVLPGNHDIGD IARDSTQPADDARLAAWETHFGAWYWQCDAVEGWRLIGLNSQIIGSGLPAEEQQWSALENMLKERGDRKPVLFLHMPLFL EDWNEGDRPAWALKTEGRLRLQRLIMEHGVFAVVSGHMHRTLHLQQKNEPVLIWTPASSFLARDESMPSQPGKELLGVTL LDFGKDDISVEFIDIDGLMKSYIEDYNGSIYRSPAKTA
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30924; Mature: 30924
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAILADPHIGSQNDVFVENWKAVVKTVNGYEDVELAIVLGDLTLDGANIEADLAFGAA CEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEEEECHH QLKAINAPVLVLPGNHDIGDIARDSTQPADDARLAAWETHFGAWYWQCDAVEGWRLIGLN HHEECCCCEEEECCCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEECC SQIIGSGLPAEEQQWSALENMLKERGDRKPVLFLHMPLFLEDWNEGDRPAWALKTEGRLR HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCCEEEEECCCHHH LQRLIMEHGVFAVVSGHMHRTLHLQQKNEPVLIWTPASSFLARDESMPSQPGKELLGVTL HHHHHHHCCEEEEEECCCEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCCCHHHHEEEE LDFGKDDISVEFIDIDGLMKSYIEDYNGSIYRSPAKTA EECCCCCCEEEEEEHHHHHHHHHHHCCCCEEECCCCCC >Mature Secondary Structure MKIAILADPHIGSQNDVFVENWKAVVKTVNGYEDVELAIVLGDLTLDGANIEADLAFGAA CEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEEEECHH QLKAINAPVLVLPGNHDIGDIARDSTQPADDARLAAWETHFGAWYWQCDAVEGWRLIGLN HHEECCCCEEEECCCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEECC SQIIGSGLPAEEQQWSALENMLKERGDRKPVLFLHMPLFLEDWNEGDRPAWALKTEGRLR HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCCEEEEECCCHHH LQRLIMEHGVFAVVSGHMHRTLHLQQKNEPVLIWTPASSFLARDESMPSQPGKELLGVTL HHHHHHHCCEEEEEECCCEEEEEEECCCCCEEEECCCHHHHHCCCCCCCCCCHHHHEEEE LDFGKDDISVEFIDIDGLMKSYIEDYNGSIYRSPAKTA EECCCCCCEEEEEEHHHHHHHHHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA