| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is hisK [H]
Identifier: 222102856
GI number: 222102856
Start: 533454
End: 534329
Strand: Reverse
Name: hisK [H]
Synonym: Avi_7588
Alternate gene names: 222102856
Gene position: 534329-533454 (Counterclockwise)
Preceding gene: 222102857
Following gene: 222102855
Centisome position: 84.58
GC content: 57.99
Gene sequence:
>876_bases ATGACCTGGTTTAGTTATCACGGTGGCCATAGCGGGCAGTTCTGCGACCATGCGAAATCCACTCTTGCCGACGTGATCGA GACGGCAATCGACCGCGGCTTTACCCATTACGGGTTGAGCGAACACTGCCCGCGGTATCGGGATGAAGATCTCTATCCCG GTGAAGAAAGGTTGGGCGTCGCAGGCCTTGCGCGCCAGTTCGCCGACTATGTCGATCACGCATTCAAGCTTCGTGACGCC TATGCGGACCGGATCGAGTTGCTGATCGGTTTTGAGACCGAGAAATTGCCGCCGGATACATGGCTTGCCAAGATGGAGGC CATACGGAACGCGCATCCGTTCGACTACATTGTTGGCAGCGTCCACGATATCGAAGGTTGCTGGCTCGACTATTCCGCGC AAGCGACCGAGACCCTCAAGAGCGAGCTGGGCGGCACCGACGCGCTACAGATCGCCTATTTCCAATCGGCGACCGACATG GTGGAACGCCTTCGTCCAGATGTCGTTGCGCATCTCGATCTCGTCAGGAAGTATGAACCGGCAGGCTTTGAATTTTCCGA CAAGGTTTTGCGTGAGGTGGACACCCTTCTCGAAGCGATCAAGGCCTATGGCGGCATAGTGGATGTGAATTGTGCCGCCT TCCGCAATGGCTTCGGCCCGGTTTACCCGCTGCCGCACATACTCAACCGTGCCCGCCATATGGGCATCCGCGTGACGCTG GGTGATGACAGCCACGGCGTGGACACCGTCGGCGTTGGGCTTGAGCAGTCAGTCGCCGCAATCCGAGCCGCTGGCTTTGA GAGCATTGCCTATCTGACGCGTTCCAATGGATGGCTCCAGGCGGACATAGACGATGTCGCACCCGGAAAAATCTGA
Upstream 100 bases:
>100_bases GGTCGAATTCATTGATATCGACGGGCTGATGAAGAGCTATATCGAAGATTACAACGGCTCGATTTATCGCTCGCCTGCGA AAACGGCCTGAGGACAAGCT
Downstream 100 bases:
>100_bases GGGCGGCGCGATGCCAGCACTTCATGCGCTTGCCATCCGGCCCGCAACCCCGAATGACATCGATTTCGTCATGCGTGTCG AACGGCTCCCCGGCTATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: HolPase [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTWFSYHGGHSGQFCDHAKSTLADVIETAIDRGFTHYGLSEHCPRYRDEDLYPGEERLGVAGLARQFADYVDHAFKLRDA YADRIELLIGFETEKLPPDTWLAKMEAIRNAHPFDYIVGSVHDIEGCWLDYSAQATETLKSELGGTDALQIAYFQSATDM VERLRPDVVAHLDLVRKYEPAGFEFSDKVLREVDTLLEAIKAYGGIVDVNCAAFRNGFGPVYPLPHILNRARHMGIRVTL GDDSHGVDTVGVGLEQSVAAIRAAGFESIAYLTRSNGWLQADIDDVAPGKI
Sequences:
>Translated_291_residues MTWFSYHGGHSGQFCDHAKSTLADVIETAIDRGFTHYGLSEHCPRYRDEDLYPGEERLGVAGLARQFADYVDHAFKLRDA YADRIELLIGFETEKLPPDTWLAKMEAIRNAHPFDYIVGSVHDIEGCWLDYSAQATETLKSELGGTDALQIAYFQSATDM VERLRPDVVAHLDLVRKYEPAGFEFSDKVLREVDTLLEAIKAYGGIVDVNCAAFRNGFGPVYPLPHILNRARHMGIRVTL GDDSHGVDTVGVGLEQSVAAIRAAGFESIAYLTRSNGWLQADIDDVAPGKI >Mature_290_residues TWFSYHGGHSGQFCDHAKSTLADVIETAIDRGFTHYGLSEHCPRYRDEDLYPGEERLGVAGLARQFADYVDHAFKLRDAY ADRIELLIGFETEKLPPDTWLAKMEAIRNAHPFDYIVGSVHDIEGCWLDYSAQATETLKSELGGTDALQIAYFQSATDMV ERLRPDVVAHLDLVRKYEPAGFEFSDKVLREVDTLLEAIKAYGGIVDVNCAAFRNGFGPVYPLPHILNRARHMGIRVTLG DDSHGVDTVGVGLEQSVAAIRAAGFESIAYLTRSNGWLQADIDDVAPGKI
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHP hydrolase family. HisK subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321138, Length=312, Percent_Identity=28.525641025641, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010140 - InterPro: IPR004013 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 32297; Mature: 32165
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWFSYHGGHSGQFCDHAKSTLADVIETAIDRGFTHYGLSEHCPRYRDEDLYPGEERLGV CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHH AGLARQFADYVDHAFKLRDAYADRIELLIGFETEKLPPDTWLAKMEAIRNAHPFDYIVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC VHDIEGCWLDYSAQATETLKSELGGTDALQIAYFQSATDMVERLRPDVVAHLDLVRKYEP HHCCCCCEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC AGFEFSDKVLREVDTLLEAIKAYGGIVDVNCAAFRNGFGPVYPLPHILNRARHMGIRVTL CCCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCCHHHHHHHHHHCCEEEEE GDDSHGVDTVGVGLEQSVAAIRAAGFESIAYLTRSNGWLQADIDDVAPGKI CCCCCCCCHHCCCHHHHHHHHHHHCHHHHHHHHCCCCEEEECHHCCCCCCC >Mature Secondary Structure TWFSYHGGHSGQFCDHAKSTLADVIETAIDRGFTHYGLSEHCPRYRDEDLYPGEERLGV CEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHH AGLARQFADYVDHAFKLRDAYADRIELLIGFETEKLPPDTWLAKMEAIRNAHPFDYIVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHCC VHDIEGCWLDYSAQATETLKSELGGTDALQIAYFQSATDMVERLRPDVVAHLDLVRKYEP HHCCCCCEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC AGFEFSDKVLREVDTLLEAIKAYGGIVDVNCAAFRNGFGPVYPLPHILNRARHMGIRVTL CCCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCCHHHHHHHHHHCCEEEEE GDDSHGVDTVGVGLEQSVAAIRAAGFESIAYLTRSNGWLQADIDDVAPGKI CCCCCCCCHHCCCHHHHHHHHHHHCHHHHHHHHCCCCEEEECHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]