| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102855
Identifier: 222102855
GI number: 222102855
Start: 532931
End: 533443
Strand: Reverse
Name: 222102855
Synonym: Avi_7587
Alternate gene names: NA
Gene position: 533443-532931 (Counterclockwise)
Preceding gene: 222102856
Following gene: 222102843
Centisome position: 84.44
GC content: 58.28
Gene sequence:
>513_bases ATGCCAGCACTTCATGCGCTTGCCATCCGGCCCGCAACCCCGAATGACATCGATTTCGTCATGCGTGTCGAACGGCTCCC CGGCTATCCAGAGCGGGTGGGTACCTATTCGGTTCAGGAGCATGAAAGCCGAATGGCTGACGAAAACTACGAATACCTGA TCGGCATATGTGGAGAAAAGCCCGTTGGCTTTGCGGTGTTGAGGCCGGACGACGGCATGGGAAATGTCGTGATCCGCCGT CTTGCCGTGGAGCAGTCCGGACGCGGCATGGGCAGCGTATTTGTGCAGCGTATCTGCGCCGCTGTTTTCTCAGATCCGAC AATTGGTCGCCTGATTCTCGATGTCCTTCCCTCAAACACAATTGCCCGGCGCGTCTATACCAAGCTGGGTTTTGTCGAGG AGGGACTGATGCGCAGCGCGTTGCGCTACCCGGATGGCCGTCGCGCCGATTTGCTTTTGATGGCGCTTCTGCGCGACGAC TGGCTCAGTGGGGCTTCGATGCTGGTTCGTTAG
Upstream 100 bases:
>100_bases GCCGCTGGCTTTGAGAGCATTGCCTATCTGACGCGTTCCAATGGATGGCTCCAGGCGGACATAGACGATGTCGCACCCGG AAAAATCTGAGGGCGGCGCG
Downstream 100 bases:
>100_bases AGTTTATCAGGGAAAAGTGGAACCCGGTTTTCCCTGGCAAAGTCTAGGTTTCGATCCGGACTGGAATTGCTTTCGATGCG GGTGTCTTCGACATCTCGTC
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPALHALAIRPATPNDIDFVMRVERLPGYPERVGTYSVQEHESRMADENYEYLIGICGEKPVGFAVLRPDDGMGNVVIRR LAVEQSGRGMGSVFVQRICAAVFSDPTIGRLILDVLPSNTIARRVYTKLGFVEEGLMRSALRYPDGRRADLLLMALLRDD WLSGASMLVR
Sequences:
>Translated_170_residues MPALHALAIRPATPNDIDFVMRVERLPGYPERVGTYSVQEHESRMADENYEYLIGICGEKPVGFAVLRPDDGMGNVVIRR LAVEQSGRGMGSVFVQRICAAVFSDPTIGRLILDVLPSNTIARRVYTKLGFVEEGLMRSALRYPDGRRADLLLMALLRDD WLSGASMLVR >Mature_169_residues PALHALAIRPATPNDIDFVMRVERLPGYPERVGTYSVQEHESRMADENYEYLIGICGEKPVGFAVLRPDDGMGNVVIRRL AVEQSGRGMGSVFVQRICAAVFSDPTIGRLILDVLPSNTIARRVYTKLGFVEEGLMRSALRYPDGRRADLLLMALLRDDW LSGASMLVR
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18937; Mature: 18806
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALHALAIRPATPNDIDFVMRVERLPGYPERVGTYSVQEHESRMADENYEYLIGICGEK CCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCCEEEEEECCCC PVGFAVLRPDDGMGNVVIRRLAVEQSGRGMGSVFVQRICAAVFSDPTIGRLILDVLPSNT CCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH IARRVYTKLGFVEEGLMRSALRYPDGRRADLLLMALLRDDWLSGASMLVR HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure PALHALAIRPATPNDIDFVMRVERLPGYPERVGTYSVQEHESRMADENYEYLIGICGEK CCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCCCCEEEEEECCCC PVGFAVLRPDDGMGNVVIRRLAVEQSGRGMGSVFVQRICAAVFSDPTIGRLILDVLPSNT CCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH IARRVYTKLGFVEEGLMRSALRYPDGRRADLLLMALLRDDWLSGASMLVR HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA