| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is zwf2 [H]
Identifier: 222102840
GI number: 222102840
Start: 514622
End: 515998
Strand: Reverse
Name: zwf2 [H]
Synonym: Avi_7570
Alternate gene names: 222102840
Gene position: 515998-514622 (Counterclockwise)
Preceding gene: 222102841
Following gene: 222102839
Centisome position: 81.67
GC content: 59.33
Gene sequence:
>1377_bases ATGATGCAAGGCAGATCCGATGCACTCGTCGTGTTCGGCGTGACCGGTGATCTCGCCTATAAGATGATCCTCCCGTCACT TTACCAGATGGTGAGGCGAGGCCAGTTGAACGAGCCTGTCATCGGTGTGGCGCTCGACGACTGGGATATTGACCGCCTGG CAGCCCGCGCTCACGATGGCATCAGCAAGCAGTTCGGCACGGTTGACGAGGCCGTTTTTGCCAGGCTGAAGGGATTGCTG CGCTATGTCAGTGGCGATTACAAAAGCCCGGCCACCTTCGATCGGCTGCGCGAGGCGCTTGGCCCCGCAACGCACCCGCT TTACTATCTGGCCATCCCGCCTTCGCTTTTCGAGACAGTCATCAAGGCATCGAAGGCGGCTGGCCTTGCTGAGAACGCCC GGCTGATGGTGGAAAAGCCCTTCGGGCGGGATCTTGCCTCCGCCCAGGCACTCGATAGTGTCTTGCACTCCGTGTTCGAG GAGGACGCGGTGTTCCGCATCGACCATTTCCTGGGCAAGGAAGCGGTGCAGAACTTGATCTATTTCCGCTTTGCCAACGC TTTTCTGGAACCGGTGTGGAACCGCACCCACGTCGAAAGCGTGCAGATCACCATGGCTGAGGATTTTGGAATTGCTGGCC GTGGCAAGTTCTATGACGAGGTTGGATGCATTCGTGACGTCATCCAGAACCACCTGATCAATATTCTCCTGCTGTTGACG ATTGAACCGCCTGTCAACAACGGTTCTGATGAACTTAGTGACGAAAAGGTCCAGGTTCTCCGGGCCATTCGCCCGCTCTC GACGCATGACCTCGTCAGGGGACAGTTCCAGGGCTATCACGACGAACCGGGTGTTGCGCCCGGCTCACCTGTCGAGACAT TTGCCGCCGTGCGCCTGTTCGTGGATACGTGGCGATGGAAGGATGTGCCCTTTTTTATCAGAGCCGGCAAGCACCTGCCG GTCCGTGCGACAGAAGTTGTCGTGCGGTTTCGCCGCCCGCCCGTTGCTCTTTTCGACGAAGTTACCGCAGCCGAAGCCAA TTATTTGCGGTTCCGTGTTGGACCGCAGGTGGCAATCGGCATCGGTACGCGCCGTAAAGCGCCGGGCGAGGGGATGGTCG GTGAATGTGTCGAACTTGGTGCGCTTGATGATACGACCGACGACATGATGCCCTACGAGCGGTTGATCGGCGATGCCCTG AACGGCAGGCGCCAGCTCTTCACCCGGCAGGACGCGGCTGAGCTGGCCTGGCGCGTGGTGGATCCTGTGCTTGATCTGAG GGAACAGCCAGACGTCTATCTGCCTGGCACCTGGGGGCCTGCGGATGCCATGAAAGATTTCGCCCCTCCCGGTGGCTGGG TCGATCCGCAACCATAA
Upstream 100 bases:
>100_bases GACGCTTCACCTCGCGCGACAACGATGAGTTTGCCAACAAGCTGCTCTCGGCCATGCGGCACGCCTTTGGCGGTCATGTG GAGAAGCCGGAGAGCACGTC
Downstream 100 bases:
>100_bases GGAAGACATCTATGGATGAGAAGCCACAGATCGTGCTTGCCGTTGATGTCGGCGGGTCGCATGTGAAAATCATGAACAGT GTTGACGGCGTGGAAAGCAA
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MMQGRSDALVVFGVTGDLAYKMILPSLYQMVRRGQLNEPVIGVALDDWDIDRLAARAHDGISKQFGTVDEAVFARLKGLL RYVSGDYKSPATFDRLREALGPATHPLYYLAIPPSLFETVIKASKAAGLAENARLMVEKPFGRDLASAQALDSVLHSVFE EDAVFRIDHFLGKEAVQNLIYFRFANAFLEPVWNRTHVESVQITMAEDFGIAGRGKFYDEVGCIRDVIQNHLINILLLLT IEPPVNNGSDELSDEKVQVLRAIRPLSTHDLVRGQFQGYHDEPGVAPGSPVETFAAVRLFVDTWRWKDVPFFIRAGKHLP VRATEVVVRFRRPPVALFDEVTAAEANYLRFRVGPQVAIGIGTRRKAPGEGMVGECVELGALDDTTDDMMPYERLIGDAL NGRRQLFTRQDAAELAWRVVDPVLDLREQPDVYLPGTWGPADAMKDFAPPGGWVDPQP
Sequences:
>Translated_458_residues MMQGRSDALVVFGVTGDLAYKMILPSLYQMVRRGQLNEPVIGVALDDWDIDRLAARAHDGISKQFGTVDEAVFARLKGLL RYVSGDYKSPATFDRLREALGPATHPLYYLAIPPSLFETVIKASKAAGLAENARLMVEKPFGRDLASAQALDSVLHSVFE EDAVFRIDHFLGKEAVQNLIYFRFANAFLEPVWNRTHVESVQITMAEDFGIAGRGKFYDEVGCIRDVIQNHLINILLLLT IEPPVNNGSDELSDEKVQVLRAIRPLSTHDLVRGQFQGYHDEPGVAPGSPVETFAAVRLFVDTWRWKDVPFFIRAGKHLP VRATEVVVRFRRPPVALFDEVTAAEANYLRFRVGPQVAIGIGTRRKAPGEGMVGECVELGALDDTTDDMMPYERLIGDAL NGRRQLFTRQDAAELAWRVVDPVLDLREQPDVYLPGTWGPADAMKDFAPPGGWVDPQP >Mature_458_residues MMQGRSDALVVFGVTGDLAYKMILPSLYQMVRRGQLNEPVIGVALDDWDIDRLAARAHDGISKQFGTVDEAVFARLKGLL RYVSGDYKSPATFDRLREALGPATHPLYYLAIPPSLFETVIKASKAAGLAENARLMVEKPFGRDLASAQALDSVLHSVFE EDAVFRIDHFLGKEAVQNLIYFRFANAFLEPVWNRTHVESVQITMAEDFGIAGRGKFYDEVGCIRDVIQNHLINILLLLT IEPPVNNGSDELSDEKVQVLRAIRPLSTHDLVRGQFQGYHDEPGVAPGSPVETFAAVRLFVDTWRWKDVPFFIRAGKHLP VRATEVVVRFRRPPVALFDEVTAAEANYLRFRVGPQVAIGIGTRRKAPGEGMVGECVELGALDDTTDDMMPYERLIGDAL NGRRQLFTRQDAAELAWRVVDPVLDLREQPDVYLPGTWGPADAMKDFAPPGGWVDPQP
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=493, Percent_Identity=36.3083164300203, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI108773793, Length=493, Percent_Identity=36.3083164300203, Blast_Score=279, Evalue=4e-75, Organism=Homo sapiens, GI52145310, Length=472, Percent_Identity=29.4491525423729, Blast_Score=169, Evalue=6e-42, Organism=Escherichia coli, GI1788158, Length=465, Percent_Identity=36.989247311828, Blast_Score=294, Evalue=1e-80, Organism=Caenorhabditis elegans, GI17538218, Length=494, Percent_Identity=35.2226720647773, Blast_Score=271, Evalue=7e-73, Organism=Saccharomyces cerevisiae, GI6324088, Length=483, Percent_Identity=35.8178053830228, Blast_Score=287, Evalue=3e-78, Organism=Drosophila melanogaster, GI24643350, Length=465, Percent_Identity=36.989247311828, Blast_Score=271, Evalue=8e-73, Organism=Drosophila melanogaster, GI24643352, Length=465, Percent_Identity=36.989247311828, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI221513548, Length=482, Percent_Identity=28.0082987551867, Blast_Score=178, Evalue=7e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 50997; Mature: 50997
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQGRSDALVVFGVTGDLAYKMILPSLYQMVRRGQLNEPVIGVALDDWDIDRLAARAHDG CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCC ISKQFGTVDEAVFARLKGLLRYVSGDYKSPATFDRLREALGPATHPLYYLAIPPSLFETV HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHH IKASKAAGLAENARLMVEKPFGRDLASAQALDSVLHSVFEEDAVFRIDHFLGKEAVQNLI HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH YFRFANAFLEPVWNRTHVESVQITMAEDFGIAGRGKFYDEVGCIRDVIQNHLINILLLLT HHHHHHHHHHHHCCCCEECEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE IEPPVNNGSDELSDEKVQVLRAIRPLSTHDLVRGQFQGYHDEPGVAPGSPVETFAAVRLF ECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH VDTWRWKDVPFFIRAGKHLPVRATEVVVRFRRPPVALFDEVTAAEANYLRFRVGPQVAIG HHHHCCCCCCHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCEEEEE IGTRRKAPGEGMVGECVELGALDDTTDDMMPYERLIGDALNGRRQLFTRQDAAELAWRVV CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH DPVLDLREQPDVYLPGTWGPADAMKDFAPPGGWVDPQP HHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MMQGRSDALVVFGVTGDLAYKMILPSLYQMVRRGQLNEPVIGVALDDWDIDRLAARAHDG CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCC ISKQFGTVDEAVFARLKGLLRYVSGDYKSPATFDRLREALGPATHPLYYLAIPPSLFETV HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHH IKASKAAGLAENARLMVEKPFGRDLASAQALDSVLHSVFEEDAVFRIDHFLGKEAVQNLI HHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH YFRFANAFLEPVWNRTHVESVQITMAEDFGIAGRGKFYDEVGCIRDVIQNHLINILLLLT HHHHHHHHHHHHCCCCEECEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE IEPPVNNGSDELSDEKVQVLRAIRPLSTHDLVRGQFQGYHDEPGVAPGSPVETFAAVRLF ECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH VDTWRWKDVPFFIRAGKHLPVRATEVVVRFRRPPVALFDEVTAAEANYLRFRVGPQVAIG HHHHCCCCCCHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCEEEEE IGTRRKAPGEGMVGECVELGALDDTTDDMMPYERLIGDALNGRRQLFTRQDAAELAWRVV CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH DPVLDLREQPDVYLPGTWGPADAMKDFAPPGGWVDPQP HHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]