| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
Click here to switch to the map view.
The map label for this gene is 222102839
Identifier: 222102839
GI number: 222102839
Start: 513930
End: 514610
Strand: Reverse
Name: 222102839
Synonym: Avi_7569
Alternate gene names: NA
Gene position: 514610-513930 (Counterclockwise)
Preceding gene: 222102840
Following gene: 222102836
Centisome position: 81.45
GC content: 55.36
Gene sequence:
>681_bases ATGGATGAGAAGCCACAGATCGTGCTTGCCGTTGATGTCGGCGGGTCGCATGTGAAAATCATGAACAGTGTTGACGGCGT GGAAAGCAAGGCTGTCTCGGGTCCTGAAATGGATGCGGCCGCAATGGCCGAGGCAGTCGAGACACTTGCGTCAGGCATGG ATTATGACGTTATCGCCATTGGTTATCCGGGTCCGGTTGTTCACAATCGTATTTTGACGGAGCCGCATAACTTAGCCGCT GGATGGACAGGTTTCGATTTCGCAAAGCGGTTCGGCAAGCCCGTGCGCATTGTCAACGATGCTCTGATGCAGGCTATGGG AAGCTATGATGGCGGACGTATGCTGTTTCTCGGCCTTGGCACCGGCCTGGGAGCGGCCATGATCGTCAACTACGTCACCC AACCCATGGAACTGGCGCATCTTCCCTATCGAAAAGGCCGCAGCTATGAGGACTATCTCGGCCAAGCGAGCCTGAAAGAG CGCGGGCACAGGAAATGGGAGAAACATGTGTTGAGGGCTGTAGAGCAACTCAGCGCGGCACTGGAGCCGGACTATGTTGT CATCGGCGGCGGCAATGTCACTAAGTTAAAAACGCTTCCGACCAATGCCCGTCACGGCGATAACGCCAATGCATTCAAAG GCGGATTTGCTCTGTGGCTGGATTCCCGGTTCCAGACTTGA
Upstream 100 bases:
>100_bases CAGACGTCTATCTGCCTGGCACCTGGGGGCCTGCGGATGCCATGAAAGATTTCGCCCCTCCCGGTGGCTGGGTCGATCCG CAACCATAAGGAAGACATCT
Downstream 100 bases:
>100_bases CTGGCCTTCGACTTCTGAAGACAGTGTGGCGTTCACTTTAGGAACTGCTGCTGCCTTGGCGATCTATTGAATGATGATTA TCGGTCTCAAGAAGCGGATA
Product: hypothetical protein
Products: (phosphate)n-1; D-glucose 6-phosphate
Alternate protein names: Polyphosphate Glucokinase; Phosphoglucose Isomerase; Polyphosphate-Glucose Phosphotransferase; Transcriptional Regulator/Sugar Kinase; Phosphate Glucokinase; ROK Domain Containing Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDEKPQIVLAVDVGGSHVKIMNSVDGVESKAVSGPEMDAAAMAEAVETLASGMDYDVIAIGYPGPVVHNRILTEPHNLAA GWTGFDFAKRFGKPVRIVNDALMQAMGSYDGGRMLFLGLGTGLGAAMIVNYVTQPMELAHLPYRKGRSYEDYLGQASLKE RGHRKWEKHVLRAVEQLSAALEPDYVVIGGGNVTKLKTLPTNARHGDNANAFKGGFALWLDSRFQT
Sequences:
>Translated_226_residues MDEKPQIVLAVDVGGSHVKIMNSVDGVESKAVSGPEMDAAAMAEAVETLASGMDYDVIAIGYPGPVVHNRILTEPHNLAA GWTGFDFAKRFGKPVRIVNDALMQAMGSYDGGRMLFLGLGTGLGAAMIVNYVTQPMELAHLPYRKGRSYEDYLGQASLKE RGHRKWEKHVLRAVEQLSAALEPDYVVIGGGNVTKLKTLPTNARHGDNANAFKGGFALWLDSRFQT >Mature_226_residues MDEKPQIVLAVDVGGSHVKIMNSVDGVESKAVSGPEMDAAAMAEAVETLASGMDYDVIAIGYPGPVVHNRILTEPHNLAA GWTGFDFAKRFGKPVRIVNDALMQAMGSYDGGRMLFLGLGTGLGAAMIVNYVTQPMELAHLPYRKGRSYEDYLGQASLKE RGHRKWEKHVLRAVEQLSAALEPDYVVIGGGNVTKLKTLPTNARHGDNANAFKGGFALWLDSRFQT
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.63
Molecular weight: Translated: 24445; Mature: 24445
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKPQIVLAVDVGGSHVKIMNSVDGVESKAVSGPEMDAAAMAEAVETLASGMDYDVIAI CCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE GYPGPVVHNRILTEPHNLAAGWTGFDFAKRFGKPVRIVNDALMQAMGSYDGGRMLFLGLG CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECC TGLGAAMIVNYVTQPMELAHLPYRKGRSYEDYLGQASLKERGHRKWEKHVLRAVEQLSAA CCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LEPDYVVIGGGNVTKLKTLPTNARHGDNANAFKGGFALWLDSRFQT CCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MDEKPQIVLAVDVGGSHVKIMNSVDGVESKAVSGPEMDAAAMAEAVETLASGMDYDVIAI CCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE GYPGPVVHNRILTEPHNLAAGWTGFDFAKRFGKPVRIVNDALMQAMGSYDGGRMLFLGLG CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECC TGLGAAMIVNYVTQPMELAHLPYRKGRSYEDYLGQASLKERGHRKWEKHVLRAVEQLSAA CCHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LEPDYVVIGGGNVTKLKTLPTNARHGDNANAFKGGFALWLDSRFQT CCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (phosphate)n; D-glucose
Specific reaction: (phosphate)n + D-glucose = (phosphate)n-1 + D-glucose 6-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA