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The map label for this gene is amaB [H]

Identifier: 222102817

GI number: 222102817

Start: 482873

End: 484132

Strand: Direct

Name: amaB [H]

Synonym: Avi_7539

Alternate gene names: 222102817

Gene position: 482873-484132 (Clockwise)

Preceding gene: 222102816

Following gene: 222102818

Centisome position: 76.43

GC content: 59.37

Gene sequence:

>1260_bases
ATGGCCAATATGCAATCCGTCCCCAGCATTGACCGCACAAAGCTGCAAGCCGATTTCGATGCGCTGGCAGCCCTGACAGA
GCCGGGCCGCCCTTGGACACGCCGCTCTTTCACGCCCCTGTTTCTGGAAGGCCGCGCTTATCTCAAAACCCGCTTTGAGG
AGGAAGGTCTGAGTGTTCGTCTGGATGCCGCTGGCAATCTGATTGGACGATGGGAGGGCGCTCAACGTCATGCGCCCGTG
TTGATGACTGGCTCGCACAGCGACACCGTGCCCAGCGGCGGACGGTTCGATGGTGTAGCGGGTGTTCTATCCGGCCTTGC
CGCCATTCGGGCGCTGCGGCTTGCCGGTTATAGGCCGCAACACCCCATTGAACTGGTTGATTTTCTTGCCGAAGAACCAA
GTGATTGGGGCCTGTCCTGCATCGGCAGCCGTGGTATGGCGGGGGCCTTGACCGACCATCATCTTGCTTTGCTTGGACCC
AATGACGAACCATTGCGCGAGGCGATAGACCGGATTGGCGGCAATGTCTCACAGCTTTCCAGCGCTCGCCGCGATGACAT
TTTTAGCTATCTGGAAATCCACATCGAGCAAGGGCCGGTGCTGGAGGCAAAGCACATCCCGATTGGCGTTGTGACTGCCA
TTGCCGGTATTGGTCGCGTTAAAGTGCGGTTCGAGGGCATCGCGGGCCATGCCGGCACCTCGCCCATGGATATGCGGGCG
GATGCGGCTTTGGCCATGGCGCGGTTTGCGCTCGCAGTTCGCGATGCCGCTTGTGCCATGCAGGGCAAAGGGCATTTTAC
CGCCACCATCGGCGTGCTCACCATTGAGCCGGGCGGGGCCAATGTGGTGCCGGGCGCATCCGAGGCCATCGTTGATATCC
GCGCCGAAGACGATGGCATGATGGATAGTTTCATTGAGGCGCTGGAGGGATTGGCCAACAAGGCGGCTACTGATGAAAAA
TGCCAGGTTGCACTGTTTGAACGCTTGAGCAAGACGCGGGCCGTTGCCTGTGATTCCTCCCTTCGAGTGGTTTTGGAAAG
TGCTGCCAGCGATCTCAATTTACCCACCCTGTCTCTTGCCTCCGGCGCTGGCCATGATGCGGCGTTCATGGCTCAGGTCA
CCAAATCAGCAATGATCTTTGTGCCGTCTCGCGATGGCAAAAGCCACACGCCGGATGAGTGGACGGATAACGAAGCCATC
GCGCTTGCCGCCGATGTGCTCGTTCGCGCCCTTGTCCATCTGGATAGCAACACGCCTTAG

Upstream 100 bases:

>100_bases
CGCGGCCAGATGATTTATGACGGCAAGGATGTTCTGGCAGCACCCGGAACGGGCCGCTTTATCAAGCCCACCCGCGCCCT
ATCAAAAGTAGCTTGATCCG

Downstream 100 bases:

>100_bases
AGTTTGTCAGGGAAAAGTGGTCACCGGTTTTCCCGAAAAGACAAACTTAAACAAATGTCTGACGCTGCGGTGCCAGATCA
ATATGCATTTCAAATGAAGG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MANMQSVPSIDRTKLQADFDALAALTEPGRPWTRRSFTPLFLEGRAYLKTRFEEEGLSVRLDAAGNLIGRWEGAQRHAPV
LMTGSHSDTVPSGGRFDGVAGVLSGLAAIRALRLAGYRPQHPIELVDFLAEEPSDWGLSCIGSRGMAGALTDHHLALLGP
NDEPLREAIDRIGGNVSQLSSARRDDIFSYLEIHIEQGPVLEAKHIPIGVVTAIAGIGRVKVRFEGIAGHAGTSPMDMRA
DAALAMARFALAVRDAACAMQGKGHFTATIGVLTIEPGGANVVPGASEAIVDIRAEDDGMMDSFIEALEGLANKAATDEK
CQVALFERLSKTRAVACDSSLRVVLESAASDLNLPTLSLASGAGHDAAFMAQVTKSAMIFVPSRDGKSHTPDEWTDNEAI
ALAADVLVRALVHLDSNTP

Sequences:

>Translated_419_residues
MANMQSVPSIDRTKLQADFDALAALTEPGRPWTRRSFTPLFLEGRAYLKTRFEEEGLSVRLDAAGNLIGRWEGAQRHAPV
LMTGSHSDTVPSGGRFDGVAGVLSGLAAIRALRLAGYRPQHPIELVDFLAEEPSDWGLSCIGSRGMAGALTDHHLALLGP
NDEPLREAIDRIGGNVSQLSSARRDDIFSYLEIHIEQGPVLEAKHIPIGVVTAIAGIGRVKVRFEGIAGHAGTSPMDMRA
DAALAMARFALAVRDAACAMQGKGHFTATIGVLTIEPGGANVVPGASEAIVDIRAEDDGMMDSFIEALEGLANKAATDEK
CQVALFERLSKTRAVACDSSLRVVLESAASDLNLPTLSLASGAGHDAAFMAQVTKSAMIFVPSRDGKSHTPDEWTDNEAI
ALAADVLVRALVHLDSNTP
>Mature_418_residues
ANMQSVPSIDRTKLQADFDALAALTEPGRPWTRRSFTPLFLEGRAYLKTRFEEEGLSVRLDAAGNLIGRWEGAQRHAPVL
MTGSHSDTVPSGGRFDGVAGVLSGLAAIRALRLAGYRPQHPIELVDFLAEEPSDWGLSCIGSRGMAGALTDHHLALLGPN
DEPLREAIDRIGGNVSQLSSARRDDIFSYLEIHIEQGPVLEAKHIPIGVVTAIAGIGRVKVRFEGIAGHAGTSPMDMRAD
AALAMARFALAVRDAACAMQGKGHFTATIGVLTIEPGGANVVPGASEAIVDIRAEDDGMMDSFIEALEGLANKAATDEKC
QVALFERLSKTRAVACDSSLRVVLESAASDLNLPTLSLASGAGHDAAFMAQVTKSAMIFVPSRDGKSHTPDEWTDNEAIA
LAADVLVRALVHLDSNTP

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=383, Percent_Identity=32.3759791122715, Blast_Score=172, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44415; Mature: 44284

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANMQSVPSIDRTKLQADFDALAALTEPGRPWTRRSFTPLFLEGRAYLKTRFEEEGLSVR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEE
LDAAGNLIGRWEGAQRHAPVLMTGSHSDTVPSGGRFDGVAGVLSGLAAIRALRLAGYRPQ
EECCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
HPIELVDFLAEEPSDWGLSCIGSRGMAGALTDHHLALLGPNDEPLREAIDRIGGNVSQLS
CHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHH
SARRDDIFSYLEIHIEQGPVLEAKHIPIGVVTAIAGIGRVKVRFEGIAGHAGTSPMDMRA
HHHHHHHHEEHHEEECCCCEEEECCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHH
DAALAMARFALAVRDAACAMQGKGHFTATIGVLTIEPGGANVVPGASEAIVDIRAEDDGM
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCH
MDSFIEALEGLANKAATDEKCQVALFERLSKTRAVACDSSLRVVLESAASDLNLPTLSLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCEEEEC
SGAGHDAAFMAQVTKSAMIFVPSRDGKSHTPDEWTDNEAIALAADVLVRALVHLDSNTP
CCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ANMQSVPSIDRTKLQADFDALAALTEPGRPWTRRSFTPLFLEGRAYLKTRFEEEGLSVR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEE
LDAAGNLIGRWEGAQRHAPVLMTGSHSDTVPSGGRFDGVAGVLSGLAAIRALRLAGYRPQ
EECCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
HPIELVDFLAEEPSDWGLSCIGSRGMAGALTDHHLALLGPNDEPLREAIDRIGGNVSQLS
CHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHH
SARRDDIFSYLEIHIEQGPVLEAKHIPIGVVTAIAGIGRVKVRFEGIAGHAGTSPMDMRA
HHHHHHHHEEHHEEECCCCEEEECCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHH
DAALAMARFALAVRDAACAMQGKGHFTATIGVLTIEPGGANVVPGASEAIVDIRAEDDGM
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCH
MDSFIEALEGLANKAATDEKCQVALFERLSKTRAVACDSSLRVVLESAASDLNLPTLSLA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCEEEEC
SGAGHDAAFMAQVTKSAMIFVPSRDGKSHTPDEWTDNEAIALAADVLVRALVHLDSNTP
CCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]