Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102791

Identifier: 222102791

GI number: 222102791

Start: 455324

End: 455677

Strand: Reverse

Name: 222102791

Synonym: Avi_7505

Alternate gene names: NA

Gene position: 455677-455324 (Counterclockwise)

Preceding gene: 222102792

Following gene: 222102790

Centisome position: 72.13

GC content: 54.8

Gene sequence:

>354_bases
ATGTCCAAGCTGACCTTTATTGACCAGAACAACCTGCCAGAACCACGCAAGGGCCAACCGTTGCCAGACAGACTGGTGGA
AGGCGATCCACAGTTTCTGACCTGGGATATTGCCCAGACGACAGACGGTCTGGTGTCCTGCGGCGTATGGGAGGTCACGC
CTGGTGCCTATCGCTCGATCAAAGGTGAAACCTTTGAATTCTGTGTCATTCTGTCCGGCGTCTCCGAGCTGATTGAAGAT
GGATGTGAACCGCGTCGAATTTCTGCGGGCGACTCATTCGTCATGCATCCGGGCTTTACCGGGGTTTGGAAGGTCATCGA
AACCACGCGGAAACTCTGGGTCTCTCGCGATTGA

Upstream 100 bases:

>100_bases
CTTTCTATCTCGCCATCAATGTCATTGCCTTGATGGCGCTGAAATTCATCGAGCGGCGACTGTCGTTCAGCCGATAACCA
TCCTATTGAAAGACCATCCT

Downstream 100 bases:

>100_bases
GATTGTCTCACGCATTCCTTCCGATCATATGAAACGGGACATCCTCATGACAAACGCGGCTCAACCATCCGTAAAATCCA
CCCCCTACTGGTGGGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSKLTFIDQNNLPEPRKGQPLPDRLVEGDPQFLTWDIAQTTDGLVSCGVWEVTPGAYRSIKGETFEFCVILSGVSELIED
GCEPRRISAGDSFVMHPGFTGVWKVIETTRKLWVSRD

Sequences:

>Translated_117_residues
MSKLTFIDQNNLPEPRKGQPLPDRLVEGDPQFLTWDIAQTTDGLVSCGVWEVTPGAYRSIKGETFEFCVILSGVSELIED
GCEPRRISAGDSFVMHPGFTGVWKVIETTRKLWVSRD
>Mature_116_residues
SKLTFIDQNNLPEPRKGQPLPDRLVEGDPQFLTWDIAQTTDGLVSCGVWEVTPGAYRSIKGETFEFCVILSGVSELIEDG
CEPRRISAGDSFVMHPGFTGVWKVIETTRKLWVSRD

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13102; Mature: 12971

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTFIDQNNLPEPRKGQPLPDRLVEGDPQFLTWDIAQTTDGLVSCGVWEVTPGAYRSI
CCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCEECCEEEECCCHHHCC
KGETFEFCVILSGVSELIEDGCEPRRISAGDSFVMHPGFTGVWKVIETTRKLWVSRD
CCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKLTFIDQNNLPEPRKGQPLPDRLVEGDPQFLTWDIAQTTDGLVSCGVWEVTPGAYRSI
CCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCEECCEEEECCCHHHCC
KGETFEFCVILSGVSELIEDGCEPRRISAGDSFVMHPGFTGVWKVIETTRKLWVSRD
CCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA