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The map label for this gene is 222102788

Identifier: 222102788

GI number: 222102788

Start: 451681

End: 452448

Strand: Reverse

Name: 222102788

Synonym: Avi_7500

Alternate gene names: NA

Gene position: 452448-451681 (Counterclockwise)

Preceding gene: 222102789

Following gene: 222102787

Centisome position: 71.62

GC content: 53.39

Gene sequence:

>768_bases
ATGAGCGATTTCAAGTGGCGTCATTTTCAGGGCGAGGTGATCTTGTGGGCAGTTCGCTGGTATTGCCGCTATGGGGTGAG
CTACCGCGACCTTGAGCAAATGATGGGCGAACGGGGCGTCGCCGTTGATCATTCCACGATTTATCGCTGGGTCCAGAAAT
ATGCACCGGAAATCGAGAAGCGGCTGCGTTGGCACTGGCGGCGGCCCCAATCAACGAGCTCGCGGGTCGATGAAACCTAT
GTGAAGGTTCGTGGCAAATGGACATACTTGTACCGCGCCGTTGACAAGTTCGGGAACACGATCGACTTCTATCTGTCACC
GACGCGCAATGCCAAAGCGGCCAAGCGCTTTCTCGGCAAGGCTCTGAATGGTCTGAAAGACTGGGAAAAGCCAAGAGTTA
TCAACACTGACAAAGCCCCAACCTATGGAATTGCCATCGCGCAATTGAAAGCTGAAGGCAAATGTCCCGATGAGCTTGTG
CATCGACAGGTCAAATACCTGAACAATGTCGTTGAAGCCGATCACGGCAAGTTGAAACAACTGATAAAGCCAGTGAGAGG
GTTCAAGACGCTGAAAACGGCCTATGCGACGATTAAAGGTTTCGAGGTCATGCGGGCGTTACGCAAGGGTCAAGCGGCTA
TTTTCAACCTTACAAAAGACATCCGCGGAGAGGCCCGCATCGTTGAACGGGCTTTCGGACTTGGACCAAGCGCTCTGACT
GAAGCCGCAGCTCTGCTCGCCCAGAATCTCCAAGCTCACACCGCTTAA

Upstream 100 bases:

>100_bases
CCTGACCTTCGCCGAGCTGGCGCGCGGCGCCGCGAAGGCTCTGTTGCAAAGATTCCGTTTGTGCTGGAAATAGGGGAGAT
AGTTTTCAGCGAGACTTTTG

Downstream 100 bases:

>100_bases
CAGCAGAGAACACTGGAAGTCCCTCGCCGGTTGAAATCTTTGCAACAGAGCCTTTTCACCTTAAATCGATTCCGATTTAA
GGAATTATGCATAAAGGCGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSDFKWRHFQGEVILWAVRWYCRYGVSYRDLEQMMGERGVAVDHSTIYRWVQKYAPEIEKRLRWHWRRPQSTSSRVDETY
VKVRGKWTYLYRAVDKFGNTIDFYLSPTRNAKAAKRFLGKALNGLKDWEKPRVINTDKAPTYGIAIAQLKAEGKCPDELV
HRQVKYLNNVVEADHGKLKQLIKPVRGFKTLKTAYATIKGFEVMRALRKGQAAIFNLTKDIRGEARIVERAFGLGPSALT
EAAALLAQNLQAHTA

Sequences:

>Translated_255_residues
MSDFKWRHFQGEVILWAVRWYCRYGVSYRDLEQMMGERGVAVDHSTIYRWVQKYAPEIEKRLRWHWRRPQSTSSRVDETY
VKVRGKWTYLYRAVDKFGNTIDFYLSPTRNAKAAKRFLGKALNGLKDWEKPRVINTDKAPTYGIAIAQLKAEGKCPDELV
HRQVKYLNNVVEADHGKLKQLIKPVRGFKTLKTAYATIKGFEVMRALRKGQAAIFNLTKDIRGEARIVERAFGLGPSALT
EAAALLAQNLQAHTA
>Mature_254_residues
SDFKWRHFQGEVILWAVRWYCRYGVSYRDLEQMMGERGVAVDHSTIYRWVQKYAPEIEKRLRWHWRRPQSTSSRVDETYV
KVRGKWTYLYRAVDKFGNTIDFYLSPTRNAKAAKRFLGKALNGLKDWEKPRVINTDKAPTYGIAIAQLKAEGKCPDELVH
RQVKYLNNVVEADHGKLKQLIKPVRGFKTLKTAYATIKGFEVMRALRKGQAAIFNLTKDIRGEARIVERAFGLGPSALTE
AAALLAQNLQAHTA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 29449; Mature: 29318

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFKWRHFQGEVILWAVRWYCRYGVSYRDLEQMMGERGVAVDHSTIYRWVQKYAPEIEK
CCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
RLRWHWRRPQSTSSRVDETYVKVRGKWTYLYRAVDKFGNTIDFYLSPTRNAKAAKRFLGK
HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
ALNGLKDWEKPRVINTDKAPTYGIAIAQLKAEGKCPDELVHRQVKYLNNVVEADHGKLKQ
HHHHHHHCCCCCEECCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
LIKPVRGFKTLKTAYATIKGFEVMRALRKGQAAIFNLTKDIRGEARIVERAFGLGPSALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHH
EAAALLAQNLQAHTA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDFKWRHFQGEVILWAVRWYCRYGVSYRDLEQMMGERGVAVDHSTIYRWVQKYAPEIEK
CCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
RLRWHWRRPQSTSSRVDETYVKVRGKWTYLYRAVDKFGNTIDFYLSPTRNAKAAKRFLGK
HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
ALNGLKDWEKPRVINTDKAPTYGIAIAQLKAEGKCPDELVHRQVKYLNNVVEADHGKLKQ
HHHHHHHCCCCCEECCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
LIKPVRGFKTLKTAYATIKGFEVMRALRKGQAAIFNLTKDIRGEARIVERAFGLGPSALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHH
EAAALLAQNLQAHTA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]