Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102787

Identifier: 222102787

GI number: 222102787

Start: 450527

End: 451267

Strand: Reverse

Name: 222102787

Synonym: Avi_7498

Alternate gene names: NA

Gene position: 451267-450527 (Counterclockwise)

Preceding gene: 222102788

Following gene: 222102786

Centisome position: 71.43

GC content: 59.24

Gene sequence:

>741_bases
ATGCTGGACCTTAGAGCTTCGTGCGAAAGCGGGGCAGCGCCTTACGGTCGGATGGTAGGACCAATGCAGAAGCTGAAGCG
TCTTCAAGCTTCGATTCCGATGATATGTCCCCCTTCAACGCGTTCACCGCGAACGGTGATCATAGCGGCCCCGCATGATG
TCGTCGCAGACTGTCGCTTTTCACGCGACTGGCTTTCCTCAGAAGAGCTTCATCGTCTGGGCCATTTCCGCTCCGCGCTT
GATCAGAGGCGGTTCGAAGCCGCGCATCTGCTGAAACGTTCCGTTCTTGCGCGACAGCGATGTGCATTTCAGTCTCAGCC
ACTGCAGCGCTTGGGTCAGGCTAGCCCTGGACCGGATGGCTCCTGTGGGGCTCGATATCGAACAGATGCCCGCCCGGGCT
GGGTGGGGCGACGTTCTTCCGAATCTTGCGCCGCTTCCCGCCGGACTGTCGGCGCTGCAATACTGGACCGCCATCGAAGC
CACGCTAAGGCCCAGAGAACGGCCTTTGCCTTGGATCCACGGCTATTGCAGATGTGCGCCAGTGAGGACGGCTTCCAGGC
CAGGTCGCCAGAATTCGCTGTGTCGGGAAGCTGGTGTCCTGCCGACGACCATCACCTTATCGCAGTGGCCGGTGGTGGGA
TCCAGCGCCTTTGGCATATTTCCCGCACCTCCAAAGATCTTGGAATACGGCTCTGTAGCTCGGTGTTTTGGCCTCTCACC
AACATCTGTGAAATCGGTTAG

Upstream 100 bases:

>100_bases
CGAGGAGCGACGCACCGGACGCTATGCGCTTGGCCGCGATACGCTGAGGACCCAGGAGGACGGGGTTTCACTCATCTCTT
GTGCCGATTTCGCTGTCGCC

Downstream 100 bases:

>100_bases
TTTACAAGCGTCTGTCAGCAAATCACTGTTTACATCTGCCGGAGCAGACTTTCATCGACTCAGAAATATGGTATTACACA
ACAAATTTTCTGTTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLDLRASCESGAAPYGRMVGPMQKLKRLQASIPMICPPSTRSPRTVIIAAPHDVVADCRFSRDWLSSEELHRLGHFRSAL
DQRRFEAAHLLKRSVLARQRCAFQSQPLQRLGQASPGPDGSCGARYRTDARPGWVGRRSSESCAASRRTVGAAILDRHRS
HAKAQRTAFALDPRLLQMCASEDGFQARSPEFAVSGSWCPADDHHLIAVAGGGIQRLWHISRTSKDLGIRLCSSVFWPLT
NICEIG

Sequences:

>Translated_246_residues
MLDLRASCESGAAPYGRMVGPMQKLKRLQASIPMICPPSTRSPRTVIIAAPHDVVADCRFSRDWLSSEELHRLGHFRSAL
DQRRFEAAHLLKRSVLARQRCAFQSQPLQRLGQASPGPDGSCGARYRTDARPGWVGRRSSESCAASRRTVGAAILDRHRS
HAKAQRTAFALDPRLLQMCASEDGFQARSPEFAVSGSWCPADDHHLIAVAGGGIQRLWHISRTSKDLGIRLCSSVFWPLT
NICEIG
>Mature_246_residues
MLDLRASCESGAAPYGRMVGPMQKLKRLQASIPMICPPSTRSPRTVIIAAPHDVVADCRFSRDWLSSEELHRLGHFRSAL
DQRRFEAAHLLKRSVLARQRCAFQSQPLQRLGQASPGPDGSCGARYRTDARPGWVGRRSSESCAASRRTVGAAILDRHRS
HAKAQRTAFALDPRLLQMCASEDGFQARSPEFAVSGSWCPADDHHLIAVAGGGIQRLWHISRTSKDLGIRLCSSVFWPLT
NICEIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27124; Mature: 27124

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLRASCESGAAPYGRMVGPMQKLKRLQASIPMICPPSTRSPRTVIIAAPHDVVADCRF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
SRDWLSSEELHRLGHFRSALDQRRFEAAHLLKRSVLARQRCAFQSQPLQRLGQASPGPDG
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SCGARYRTDARPGWVGRRSSESCAASRRTVGAAILDRHRSHAKAQRTAFALDPRLLQMCA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
SEDGFQARSPEFAVSGSWCPADDHHLIAVAGGGIQRLWHISRTSKDLGIRLCSSVFWPLT
CCCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NICEIG
HHHCCC
>Mature Secondary Structure
MLDLRASCESGAAPYGRMVGPMQKLKRLQASIPMICPPSTRSPRTVIIAAPHDVVADCRF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
SRDWLSSEELHRLGHFRSALDQRRFEAAHLLKRSVLARQRCAFQSQPLQRLGQASPGPDG
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SCGARYRTDARPGWVGRRSSESCAASRRTVGAAILDRHRSHAKAQRTAFALDPRLLQMCA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
SEDGFQARSPEFAVSGSWCPADDHHLIAVAGGGIQRLWHISRTSKDLGIRLCSSVFWPLT
CCCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NICEIG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA