Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102747

Identifier: 222102747

GI number: 222102747

Start: 401388

End: 401936

Strand: Direct

Name: 222102747

Synonym: Avi_7432

Alternate gene names: NA

Gene position: 401388-401936 (Clockwise)

Preceding gene: 222102746

Following gene: 222102755

Centisome position: 63.53

GC content: 55.92

Gene sequence:

>549_bases
ATGCGTTTGACCGATCTACAATTGGAAGACATGTCACCGGCACAGAAAAATGTGGCCGAGGAAGCTAAATCTGGCCGACG
CGGTCACATTCCAGCACCGCTCAGGGCGTGGATCCACAGCCCCGAATTGGGCGCAAGGGCGCAACGCCTCGGCGAATTCG
TGCGCTATAACACAGAGCTTGGTGCTGATCTGTCCGAACTTGCGATTCTTGTGGTTGCGCGCGACTGGGGCGCCGTTTTC
GAGTGGGATGCGCATAAGCGGGAAGCGTTGAAAGCGGGCATAGAGCCGCATGTCATTGAGGCAATCCGAACACGCACCAG
TCCCGCCTTTCCAAGCAACAAAGCCCGCATCGTCTATTGTTATACAAAGACATTATTGGAGACCCGCTTCATCCCAAGCC
CGCTTCATGACGAGGCTGTGACTGTTCTGGGGCAAGCGGGCCTAGCAGAACTCGTGGGTGTGGTTGGCTACTACACGTTT
GTTGCTATGACCCTCAATGCCTTTGAGATCGGGGTAGAAGAGGGCTCTGGGGATTTGGGGGTGAGCTGA

Upstream 100 bases:

>100_bases
GGCGATGAATGCGGCCCGGCAGATCGAAACATCGATGCGCGGCAACCGTGAAGTTCAGGCGAAAGCCCTCCTGCTCTCGT
GACACTCAGGAAATACGCGC

Downstream 100 bases:

>100_bases
TCCTTGCACTGCTTGTCGGTGAGGTCAGTTTTTGTTTTTCGTTCTACCGCGCAACAGCCGTCGAACCGGGAAAAACTCAA
TGCCGGTGCGCTCTGAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: 4-Carboxymuconolactone Decarboxylase Domain Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRLTDLQLEDMSPAQKNVAEEAKSGRRGHIPAPLRAWIHSPELGARAQRLGEFVRYNTELGADLSELAILVVARDWGAVF
EWDAHKREALKAGIEPHVIEAIRTRTSPAFPSNKARIVYCYTKTLLETRFIPSPLHDEAVTVLGQAGLAELVGVVGYYTF
VAMTLNAFEIGVEEGSGDLGVS

Sequences:

>Translated_182_residues
MRLTDLQLEDMSPAQKNVAEEAKSGRRGHIPAPLRAWIHSPELGARAQRLGEFVRYNTELGADLSELAILVVARDWGAVF
EWDAHKREALKAGIEPHVIEAIRTRTSPAFPSNKARIVYCYTKTLLETRFIPSPLHDEAVTVLGQAGLAELVGVVGYYTF
VAMTLNAFEIGVEEGSGDLGVS
>Mature_182_residues
MRLTDLQLEDMSPAQKNVAEEAKSGRRGHIPAPLRAWIHSPELGARAQRLGEFVRYNTELGADLSELAILVVARDWGAVF
EWDAHKREALKAGIEPHVIEAIRTRTSPAFPSNKARIVYCYTKTLLETRFIPSPLHDEAVTVLGQAGLAELVGVVGYYTF
VAMTLNAFEIGVEEGSGDLGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19971; Mature: 19971

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTDLQLEDMSPAQKNVAEEAKSGRRGHIPAPLRAWIHSPELGARAQRLGEFVRYNTEL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GADLSELAILVVARDWGAVFEWDAHKREALKAGIEPHVIEAIRTRTSPAFPSNKARIVYC
CCCHHHHEEEEEECCCCCEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
YTKTLLETRFIPSPLHDEAVTVLGQAGLAELVGVVGYYTFVAMTLNAFEIGVEEGSGDLG
EHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
VS
CC
>Mature Secondary Structure
MRLTDLQLEDMSPAQKNVAEEAKSGRRGHIPAPLRAWIHSPELGARAQRLGEFVRYNTEL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GADLSELAILVVARDWGAVFEWDAHKREALKAGIEPHVIEAIRTRTSPAFPSNKARIVYC
CCCHHHHEEEEEECCCCCEEECCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
YTKTLLETRFIPSPLHDEAVTVLGQAGLAELVGVVGYYTFVAMTLNAFEIGVEEGSGDLG
EHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
VS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA