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The map label for this gene is yagI [C]

Identifier: 222102746

GI number: 222102746

Start: 400596

End: 401369

Strand: Direct

Name: yagI [C]

Synonym: Avi_7431

Alternate gene names: 222102746

Gene position: 400596-401369 (Clockwise)

Preceding gene: 222102745

Following gene: 222102747

Centisome position: 63.41

GC content: 55.94

Gene sequence:

>774_bases
ATGTCAAGCCTAACGAAAATGCTCCTGATCCTTGATCTGTTTTCGGTTGATAAGCCGATTTGGTCAGCTGACGAGATCAT
CCAATATTGCGGGCATTCGCGTCCCACCGGCTATCGCTATGTCAAGGAACTCTGCGACGCTGGTTTGTTGCGCCGCGCAG
AGGGTGGCTATTCTCTTGGTCCGCGCGTGATTGAACTCGATTACTATATCCGCCAATGCGACCCGCTGTTGATCGCATGT
CGGCCAGTTATGGTGCGGGTGGCGCAGGAATCGGGCTGCGATGTGCTGCTGGCCAGCATGTATGGTACGAAGATAATGGC
GGTTCACCAGGAGTTGGCGCACGAAACAGGTCAAATCGCATTCGGTCGAGGACGGCCGATGCCGCTGTTTCGCGGCGGCG
GATCCAAGGTCCTGCTGGCGTCGATGACAGCTTCGCAGCTCAAGAAGCTCTATGATCGTTATGGAGCGGAAATAGCCGAG
GCGGGGCTTGGAGCCACATGGGCAGATTTTCGCAAGCAGATGCTGAAATATCGAAATGACGGCCATGTTGTCTCGATTGG
TGAGCTTGACCCGAATGCTGCTGGTGTCGCGATTCCGATCCCTGTCGGTGACGCACTCGACCCGGCGGCCCTGGTGATTT
TAACAACGCGCTCGCGCTTTGATCTTATGGAAAAAGCACTGCTGGTCGATATGGCGATGAATGCGGCCCGGCAGATCGAA
ACATCGATGCGCGGCAACCGTGAAGTTCAGGCGAAAGCCCTCCTGCTCTCGTGA

Upstream 100 bases:

>100_bases
GTGCATTTTTTTGGTCGAGTCTCTCTGCGTGGGATAGGTGCGTCGCAACGGTGCGATGACCCTCACGGATCGGCGCAAAC
AACTCTACACGCGAGCCTGC

Downstream 100 bases:

>100_bases
CACTCAGGAAATACGCGCATGCGTTTGACCGATCTACAATTGGAAGACATGTCACCGGCACAGAAAAATGTGGCCGAGGA
AGCTAAATCTGGCCGACGCG

Product: Transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator IclR Family; Transcriptional Regulator Family; Transcriptional Regulator Family Protein; Regulatory Proteins IclR; Transcriptional Regulatory Protein; Helix-Turn-Helix Type; DeoR-Like Helix-Turn-Helix Domain-Containing; Regulatory Protein IclR; Transcription Regulator Protein; IclR-Family Transcriptional Regulator

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSSLTKMLLILDLFSVDKPIWSADEIIQYCGHSRPTGYRYVKELCDAGLLRRAEGGYSLGPRVIELDYYIRQCDPLLIAC
RPVMVRVAQESGCDVLLASMYGTKIMAVHQELAHETGQIAFGRGRPMPLFRGGGSKVLLASMTASQLKKLYDRYGAEIAE
AGLGATWADFRKQMLKYRNDGHVVSIGELDPNAAGVAIPIPVGDALDPAALVILTTRSRFDLMEKALLVDMAMNAARQIE
TSMRGNREVQAKALLLS

Sequences:

>Translated_257_residues
MSSLTKMLLILDLFSVDKPIWSADEIIQYCGHSRPTGYRYVKELCDAGLLRRAEGGYSLGPRVIELDYYIRQCDPLLIAC
RPVMVRVAQESGCDVLLASMYGTKIMAVHQELAHETGQIAFGRGRPMPLFRGGGSKVLLASMTASQLKKLYDRYGAEIAE
AGLGATWADFRKQMLKYRNDGHVVSIGELDPNAAGVAIPIPVGDALDPAALVILTTRSRFDLMEKALLVDMAMNAARQIE
TSMRGNREVQAKALLLS
>Mature_256_residues
SSLTKMLLILDLFSVDKPIWSADEIIQYCGHSRPTGYRYVKELCDAGLLRRAEGGYSLGPRVIELDYYIRQCDPLLIACR
PVMVRVAQESGCDVLLASMYGTKIMAVHQELAHETGQIAFGRGRPMPLFRGGGSKVLLASMTASQLKKLYDRYGAEIAEA
GLGATWADFRKQMLKYRNDGHVVSIGELDPNAAGVAIPIPVGDALDPAALVILTTRSRFDLMEKALLVDMAMNAARQIET
SMRGNREVQAKALLLS

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28223; Mature: 28092

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLTKMLLILDLFSVDKPIWSADEIIQYCGHSRPTGYRYVKELCDAGLLRRAEGGYSLG
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PRVIELDYYIRQCDPLLIACRPVMVRVAQESGCDVLLASMYGTKIMAVHQELAHETGQIA
CEEEEEEHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEHHHHCHHHHHHHHHHHHHCCCEE
FGRGRPMPLFRGGGSKVLLASMTASQLKKLYDRYGAEIAEAGLGATWADFRKQMLKYRND
ECCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHCCC
GHVVSIGELDPNAAGVAIPIPVGDALDPAALVILTTRSRFDLMEKALLVDMAMNAARQIE
CCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
TSMRGNREVQAKALLLS
HHHCCCCCHHHEEEECC
>Mature Secondary Structure 
SSLTKMLLILDLFSVDKPIWSADEIIQYCGHSRPTGYRYVKELCDAGLLRRAEGGYSLG
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PRVIELDYYIRQCDPLLIACRPVMVRVAQESGCDVLLASMYGTKIMAVHQELAHETGQIA
CEEEEEEHHHHHCCCCEEHHHHHHHHHHHCCCCCEEEHHHHCHHHHHHHHHHHHHCCCEE
FGRGRPMPLFRGGGSKVLLASMTASQLKKLYDRYGAEIAEAGLGATWADFRKQMLKYRND
ECCCCCCCEEECCCCEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHCCC
GHVVSIGELDPNAAGVAIPIPVGDALDPAALVILTTRSRFDLMEKALLVDMAMNAARQIE
CCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
TSMRGNREVQAKALLLS
HHHCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA