| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is hsaA [H]
Identifier: 222102735
GI number: 222102735
Start: 389768
End: 390919
Strand: Direct
Name: hsaA [H]
Synonym: Avi_7417
Alternate gene names: 222102735
Gene position: 389768-390919 (Clockwise)
Preceding gene: 222102733
Following gene: 222102736
Centisome position: 61.69
GC content: 58.51
Gene sequence:
>1152_bases ATGATCGCGCGAGCTACGGGCATGATCGGCACACTCAGAGCGCGCCAGGCGGATGCCGAGGCCGGTGGGCGCTTGCTGGA GGTTACCCATCAGGAGTTCATGCGGGCTGGATTCTATCGTGTTGTCCAGCCACGTCGCTTCGGTGGCTATGAATTTGACC TGACCACTTACATGAAGGTGATGATGGAAATCGCCCGCGGCTGCCCTTCGAGCGGCTGGGTTCTGGCGCTTGTGTCCGGC CATCCCATCATGCTTGCCGACTTTAGCGAACGTGCGCAGATCGAAGCCTATGGCGATGACGGTGATTATCGTTGTCCCTC GGTTGGTTCGCCGGTTCCGGTAACGCTTGAAAAGGGCGGATTTCGTGTCAGCGGCGGGTGGGACTATGCATCGGGTTGCG ATGTCTCCACCCACGCGATGGTCAGTGGTCTGACGCCGGAAGCCGACGGCAGCATGACGCCCCGATTGATGCTGGTTGAC CGTTCTGATTATGAAATCGTCAATAACTGGGACATGATTGGGATGCAGGGCACCGGCTCTCGTCGGCTGGTCGTCAAGGA TGTGTTTGTGCCGGAATACCGCACCGCTCCCATCGTTATGTGGCGGGGTGAGCGCGGCGCGGCTGTACATGCAAACCCAA TGTATAACGGCCGTAAAGCATCCTATTTTGTCATTGAGCTGGGTGCGGTTGTCGTCGGCGCTGTGAAGGGTGCGCTGGAT ATTTTCGAAGACATCTTGCGCAACAAGCCGATGCGTTTCTCATCAAAGCAGCGCTTGTACGAGAGCCATGAGTTCCAGCA ATATTATGGCGATGCCCAAACCAAGATCGATTCCGCCGAAGCGCTGCTTTTGAAGGTGACGGAACGCTATCTGGAAGCGT GCAGCCTGCACCAGGAAACTGGCGAGGGTTTTACCGAAGAGACCGACAGACGGCTCTTTGCTGCCGCCCAGGAGGCCTGC CGCCTTGCATGGGACGGGTTGGAAATCATCTTCACCACGGCGGGCACGAGCACCGGGGCCAAGCAATCCATGCTCGCCCG TATCTATCGAGACGCGGCCGTGCAGAAAACCCATTTTGTTCAGCAACGGTCGCGCACGGCCGTCAACGCTGCACGCCTTC ACTTCGGGCTTGCCCCGCTCAGCCCGTTCTGA
Upstream 100 bases:
>100_bases GGGCTCATGCGGAGGGTGAGGTGCGTTAATGGTAAATGTTGAGCGAAAGTTCGAAACTGTTGGATTGGAGCCGCCGGAGC CGAACTTGCAGCCAGATGAG
Downstream 100 bases:
>100_bases CTGCTATGGAGACCATCTTGACATCAGCAGGGTCGTCGCTCGATCCAGACTGGATCCGTGCGGAGTTTAAACGTCGGCGT GGTCACTGGCATGATGACTG
Product: oxidoreductase
Products: NA
Alternate protein names: 3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione 4-hydroxylase [H]
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MIARATGMIGTLRARQADAEAGGRLLEVTHQEFMRAGFYRVVQPRRFGGYEFDLTTYMKVMMEIARGCPSSGWVLALVSG HPIMLADFSERAQIEAYGDDGDYRCPSVGSPVPVTLEKGGFRVSGGWDYASGCDVSTHAMVSGLTPEADGSMTPRLMLVD RSDYEIVNNWDMIGMQGTGSRRLVVKDVFVPEYRTAPIVMWRGERGAAVHANPMYNGRKASYFVIELGAVVVGAVKGALD IFEDILRNKPMRFSSKQRLYESHEFQQYYGDAQTKIDSAEALLLKVTERYLEACSLHQETGEGFTEETDRRLFAAAQEAC RLAWDGLEIIFTTAGTSTGAKQSMLARIYRDAAVQKTHFVQQRSRTAVNAARLHFGLAPLSPF
Sequences:
>Translated_383_residues MIARATGMIGTLRARQADAEAGGRLLEVTHQEFMRAGFYRVVQPRRFGGYEFDLTTYMKVMMEIARGCPSSGWVLALVSG HPIMLADFSERAQIEAYGDDGDYRCPSVGSPVPVTLEKGGFRVSGGWDYASGCDVSTHAMVSGLTPEADGSMTPRLMLVD RSDYEIVNNWDMIGMQGTGSRRLVVKDVFVPEYRTAPIVMWRGERGAAVHANPMYNGRKASYFVIELGAVVVGAVKGALD IFEDILRNKPMRFSSKQRLYESHEFQQYYGDAQTKIDSAEALLLKVTERYLEACSLHQETGEGFTEETDRRLFAAAQEAC RLAWDGLEIIFTTAGTSTGAKQSMLARIYRDAAVQKTHFVQQRSRTAVNAARLHFGLAPLSPF >Mature_383_residues MIARATGMIGTLRARQADAEAGGRLLEVTHQEFMRAGFYRVVQPRRFGGYEFDLTTYMKVMMEIARGCPSSGWVLALVSG HPIMLADFSERAQIEAYGDDGDYRCPSVGSPVPVTLEKGGFRVSGGWDYASGCDVSTHAMVSGLTPEADGSMTPRLMLVD RSDYEIVNNWDMIGMQGTGSRRLVVKDVFVPEYRTAPIVMWRGERGAAVHANPMYNGRKASYFVIELGAVVVGAVKGALD IFEDILRNKPMRFSSKQRLYESHEFQQYYGDAQTKIDSAEALLLKVTERYLEACSLHQETGEGFTEETDRRLFAAAQEAC RLAWDGLEIIFTTAGTSTGAKQSMLARIYRDAAVQKTHFVQQRSRTAVNAARLHFGLAPLSPF
Specific function: Catalyzes the o-hydroxylation of 3-hydroxy-9,10- seconandrost-1,3,5(10)-triene-9,17-dione (3-HSA) to 3,4-dihydroxy- 9,10-seconandrost-1,3,5(10)-triene-9,17-dione (3,4-DHSA) in the catabolism of cholesterol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FADH(2)-utilizing monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006092 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 42451; Mature: 42451
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARATGMIGTLRARQADAEAGGRLLEVTHQEFMRAGFYRVVQPRRFGGYEFDLTTYMKV CCCCCCCCHHHHHHHHCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH MMEIARGCPSSGWVLALVSGHPIMLADFSERAQIEAYGDDGDYRCPSVGSPVPVTLEKGG HHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC FRVSGGWDYASGCDVSTHAMVSGLTPEADGSMTPRLMLVDRSDYEIVNNWDMIGMQGTGS EEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCEEEEECCCCC RRLVVKDVFVPEYRTAPIVMWRGERGAAVHANPMYNGRKASYFVIELGAVVVGAVKGALD CEEEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHH IFEDILRNKPMRFSSKQRLYESHEFQQYYGDAQTKIDSAEALLLKVTERYLEACSLHQET HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GEGFTEETDRRLFAAAQEACRLAWDGLEIIFTTAGTSTGAKQSMLARIYRDAAVQKTHFV CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH QQRSRTAVNAARLHFGLAPLSPF HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIARATGMIGTLRARQADAEAGGRLLEVTHQEFMRAGFYRVVQPRRFGGYEFDLTTYMKV CCCCCCCCHHHHHHHHCCHHHCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH MMEIARGCPSSGWVLALVSGHPIMLADFSERAQIEAYGDDGDYRCPSVGSPVPVTLEKGG HHHHHHCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC FRVSGGWDYASGCDVSTHAMVSGLTPEADGSMTPRLMLVDRSDYEIVNNWDMIGMQGTGS EEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCEEEEECCCCC RRLVVKDVFVPEYRTAPIVMWRGERGAAVHANPMYNGRKASYFVIELGAVVVGAVKGALD CEEEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHH IFEDILRNKPMRFSSKQRLYESHEFQQYYGDAQTKIDSAEALLLKVTERYLEACSLHQET HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GEGFTEETDRRLFAAAQEACRLAWDGLEIIFTTAGTSTGAKQSMLARIYRDAAVQKTHFV CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH QQRSRTAVNAARLHFGLAPLSPF HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA