Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102733

Identifier: 222102733

GI number: 222102733

Start: 387340

End: 387768

Strand: Direct

Name: 222102733

Synonym: Avi_7414

Alternate gene names: NA

Gene position: 387340-387768 (Clockwise)

Preceding gene: 222102732

Following gene: 222102735

Centisome position: 61.31

GC content: 52.45

Gene sequence:

>429_bases
ATGAAACTATCTCAGTCAGTCGAATTGAAGGCACCCGCAGCAGAGGTCTGGACGTTCATCAGCGATTTTTACAATTTTCA
TGCTTGGCAGCCCCATATTGAATCCACGGCTCCGGGGCCAGCCAAGGGTGAGCGCATTGTCAAGATGAAGCGCGGCAACA
CCATCCTTGATCGCATTGCTGTGCTGGACAATGAAAAGCGCACACTGGCTTACGAAATGGTTCCGAACCAGGATCTTCCT
CCAGGTGCGCCGAAGCTCGAAGGTTTTCTGGCGACATTCGTTGTGGGTGAGTCAGGTGCGGGCTCTAAAGTTGAGTATAG
CATTGCTGTTGACGTGCCGAGTGCGATCCAGGAAATGGCAGAAAAAGGAATTGGCAGCGACATCTCCGGTGCCTTGCAGG
GGCTGAAGGACAAGTTTGAAGAAGCCTGA

Upstream 100 bases:

>100_bases
GCCATTGGGTCGGGATCAGGCAGTGGCGTGAACAAAGGTGGGGACGATTTTTTTTAATCTTCCGTTTCGTTCCGGGACGG
AAATAACAAGGGAGAAGACA

Downstream 100 bases:

>100_bases
GATCTGAACAGGATTTCAATACCGGGTCATTTGAACCGCCGCTCGCAAGAGCGGCGGTTTTTCTTTGTGGATGACATGCA
GCGATAGGGTTTTGACGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKLSQSVELKAPAAEVWTFISDFYNFHAWQPHIESTAPGPAKGERIVKMKRGNTILDRIAVLDNEKRTLAYEMVPNQDLP
PGAPKLEGFLATFVVGESGAGSKVEYSIAVDVPSAIQEMAEKGIGSDISGALQGLKDKFEEA

Sequences:

>Translated_142_residues
MKLSQSVELKAPAAEVWTFISDFYNFHAWQPHIESTAPGPAKGERIVKMKRGNTILDRIAVLDNEKRTLAYEMVPNQDLP
PGAPKLEGFLATFVVGESGAGSKVEYSIAVDVPSAIQEMAEKGIGSDISGALQGLKDKFEEA
>Mature_142_residues
MKLSQSVELKAPAAEVWTFISDFYNFHAWQPHIESTAPGPAKGERIVKMKRGNTILDRIAVLDNEKRTLAYEMVPNQDLP
PGAPKLEGFLATFVVGESGAGSKVEYSIAVDVPSAIQEMAEKGIGSDISGALQGLKDKFEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15392; Mature: 15392

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSQSVELKAPAAEVWTFISDFYNFHAWQPHIESTAPGPAKGERIVKMKRGNTILDRIA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
VLDNEKRTLAYEMVPNQDLPPGAPKLEGFLATFVVGESGAGSKVEYSIAVDVPSAIQEMA
HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCCCCCCEEEEEEEECCHHHHHHHH
EKGIGSDISGALQGLKDKFEEA
HCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSQSVELKAPAAEVWTFISDFYNFHAWQPHIESTAPGPAKGERIVKMKRGNTILDRIA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
VLDNEKRTLAYEMVPNQDLPPGAPKLEGFLATFVVGESGAGSKVEYSIAVDVPSAIQEMA
HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCCCCCCEEEEEEEECCHHHHHHHH
EKGIGSDISGALQGLKDKFEEA
HCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA