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The map label for this gene is amyD [H]

Identifier: 222102687

GI number: 222102687

Start: 335160

End: 336269

Strand: Direct

Name: amyD [H]

Synonym: Avi_7357

Alternate gene names: 222102687

Gene position: 335160-336269 (Clockwise)

Preceding gene: 222102686

Following gene: 222102688

Centisome position: 53.05

GC content: 58.74

Gene sequence:

>1110_bases
ATGTCCGACACGACCATGCCTGCCATTCGCCCGATTGAAGGGGCATCGCTACGGCAAACCGGTGCCCGGCGTGGTCGCCT
GCTGCTGGCGGTGGCCACCGTGCTGCTGCTTGGCGTACTCGTTCTGCAAATTCTCGATGCAGCCGGGGTGACCTCGCTTG
GTCTCGTCAGTTGGCGTCCCTTGCTCTATGCCTATATCGTCTGGGCCGTGGCTCTGTGCGCCGCGCAAATCATGATCCGG
GGCGAAGCTGGCCAGCGGGCCGTGTTCGTTCTACCGGCGGTGCTGTTTACGGTGGCCATGGTGGTATTTCCCACGGTGTT
CGGCCTCTACATTGCCTTCACAGACTGGAACCTCAGCGCTGCCGCAGGACGGCGTTTCAATGGCATCGACAACCTGCGCA
CGCTGTTTGCCGACTTTTACTTCTGGAACGCGCTGTTGAACATGGTCTATTATGTTCTGGCGGTTCTTGTGCAATATGCC
ATTGCCTTTGGCCTCGCGCTGCTTTTGAACGCCGAAATCAAGGCCCGGAAGTTCTTTCGCGTCGCCTTCCTTCTGCCGCT
GATGTTGAGCCCGGTTGCCGTCAGCTGGATGATCGGCAAATCGCTGATGGAATATCGCTTCGGCCCGGCGGCAACGCTTG
CCCGGCATCTCGGATGGGACAACCCGGCGTTTTTCTCGACCCCATGGCTTGCCCGTCTCTCGCTGATGGCCATGGATGCC
TGGGTCTCGATCCCCTTCATGATGATCCTGCTTCTGGCCGGGCTTCAGGCCTTGCCAACGGAGATTAAGGAGGCCGCCAA
GGTCGATGGCGCTTCCGGCTGGCAGAGCTTCAAGGAAATCACCTTTCCGCTGATGCTACCGGTCAGCGTCACCGTGATTA
TCCTGCGGATCATTTTCCAGTTGAAGCTTGCCGATATCGTCATCAATGTCACAGCAGGCGGACCCGGCGGCGCGACAGAT
ACGGTCTCCAGCTTCATCTTCCGGGAATATCGTGACCGCTCGAATGTCGGCTACGGCACCATGCTGGCCGAGTTCTATCT
CGTCATCATCATTATCTTCGTCTCGCTCATCCTCAAGGTGACGAGCCGCTGGCTGCAACGTTCCAACTGA

Upstream 100 bases:

>100_bases
CGTCAGGCGGCTTTCTCATTCCGCCTGACGTCCATTCATCAGCCTAAAGCCAATCTTGGCTTCCGGTCTCTGCTCGGGCG
TTGTGCCCAAGGGTTTGCTT

Downstream 100 bases:

>100_bases
GGGTTAGACCATGGCACGCAACCCCACTCGCCATAGCGGTCCTGAAACAAGGTTTCGCCGCCCTCGCTTCATGACGGGCA
GCCTGCTGATTTACACGGCG

Product: ABC transporter membrane spanning protein (sugar)

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSDTTMPAIRPIEGASLRQTGARRGRLLLAVATVLLLGVLVLQILDAAGVTSLGLVSWRPLLYAYIVWAVALCAAQIMIR
GEAGQRAVFVLPAVLFTVAMVVFPTVFGLYIAFTDWNLSAAAGRRFNGIDNLRTLFADFYFWNALLNMVYYVLAVLVQYA
IAFGLALLLNAEIKARKFFRVAFLLPLMLSPVAVSWMIGKSLMEYRFGPAATLARHLGWDNPAFFSTPWLARLSLMAMDA
WVSIPFMMILLLAGLQALPTEIKEAAKVDGASGWQSFKEITFPLMLPVSVTVIILRIIFQLKLADIVINVTAGGPGGATD
TVSSFIFREYRDRSNVGYGTMLAEFYLVIIIIFVSLILKVTSRWLQRSN

Sequences:

>Translated_369_residues
MSDTTMPAIRPIEGASLRQTGARRGRLLLAVATVLLLGVLVLQILDAAGVTSLGLVSWRPLLYAYIVWAVALCAAQIMIR
GEAGQRAVFVLPAVLFTVAMVVFPTVFGLYIAFTDWNLSAAAGRRFNGIDNLRTLFADFYFWNALLNMVYYVLAVLVQYA
IAFGLALLLNAEIKARKFFRVAFLLPLMLSPVAVSWMIGKSLMEYRFGPAATLARHLGWDNPAFFSTPWLARLSLMAMDA
WVSIPFMMILLLAGLQALPTEIKEAAKVDGASGWQSFKEITFPLMLPVSVTVIILRIIFQLKLADIVINVTAGGPGGATD
TVSSFIFREYRDRSNVGYGTMLAEFYLVIIIIFVSLILKVTSRWLQRSN
>Mature_368_residues
SDTTMPAIRPIEGASLRQTGARRGRLLLAVATVLLLGVLVLQILDAAGVTSLGLVSWRPLLYAYIVWAVALCAAQIMIRG
EAGQRAVFVLPAVLFTVAMVVFPTVFGLYIAFTDWNLSAAAGRRFNGIDNLRTLFADFYFWNALLNMVYYVLAVLVQYAI
AFGLALLLNAEIKARKFFRVAFLLPLMLSPVAVSWMIGKSLMEYRFGPAATLARHLGWDNPAFFSTPWLARLSLMAMDAW
VSIPFMMILLLAGLQALPTEIKEAAKVDGASGWQSFKEITFPLMLPVSVTVIILRIIFQLKLADIVINVTAGGPGGATDT
VSSFIFREYRDRSNVGYGTMLAEFYLVIIIIFVSLILKVTSRWLQRSN

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790465, Length=190, Percent_Identity=30, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787570, Length=240, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789861, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40763; Mature: 40632

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTTMPAIRPIEGASLRQTGARRGRLLLAVATVLLLGVLVLQILDAAGVTSLGLVSWRP
CCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LLYAYIVWAVALCAAQIMIRGEAGQRAVFVLPAVLFTVAMVVFPTVFGLYIAFTDWNLSA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAGRRFNGIDNLRTLFADFYFWNALLNMVYYVLAVLVQYAIAFGLALLLNAEIKARKFFR
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VAFLLPLMLSPVAVSWMIGKSLMEYRFGPAATLARHLGWDNPAFFSTPWLARLSLMAMDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
WVSIPFMMILLLAGLQALPTEIKEAAKVDGASGWQSFKEITFPLMLPVSVTVIILRIIFQ
HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLADIVINVTAGGPGGATDTVSSFIFREYRDRSNVGYGTMLAEFYLVIIIIFVSLILKV
HHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TSRWLQRSN
HHHHHHCCC
>Mature Secondary Structure 
SDTTMPAIRPIEGASLRQTGARRGRLLLAVATVLLLGVLVLQILDAAGVTSLGLVSWRP
CCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LLYAYIVWAVALCAAQIMIRGEAGQRAVFVLPAVLFTVAMVVFPTVFGLYIAFTDWNLSA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAGRRFNGIDNLRTLFADFYFWNALLNMVYYVLAVLVQYAIAFGLALLLNAEIKARKFFR
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VAFLLPLMLSPVAVSWMIGKSLMEYRFGPAATLARHLGWDNPAFFSTPWLARLSLMAMDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
WVSIPFMMILLLAGLQALPTEIKEAAKVDGASGWQSFKEITFPLMLPVSVTVIILRIIFQ
HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLADIVINVTAGGPGGATDTVSSFIFREYRDRSNVGYGTMLAEFYLVIIIIFVSLILKV
HHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TSRWLQRSN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]