Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102525

Identifier: 222102525

GI number: 222102525

Start: 119889

End: 120803

Strand: Reverse

Name: 222102525

Synonym: Avi_7153

Alternate gene names: NA

Gene position: 120803-119889 (Counterclockwise)

Preceding gene: 222102526

Following gene: 222102520

Centisome position: 19.12

GC content: 57.92

Gene sequence:

>915_bases
ATGAATTTCACATCTGGCAGTCTGCCCGTCGCAACGCGCGACGTTTCTCAAGCGAAAGCAGACCTTGATCAGTTCGGCTA
TGCGATCCTGGCCGATTTGGTGACGGGTTCTGGGCTGGAAGCTCTTCGCCAGCGACTGGTCGAACAGGCGGATGCGGAAT
GCGCCGCCGGAGTAGCACTTTTGCATGATGTGGATGACAAGCCACTATCGCAGGAAGTGGCACGAACAATAGATCAACAT
CTGGTGCCCAGACAGATCCTGATGATGCTGTACAACAAGGGGAAGGTGTTTCGCGAAATCGCTCATAACCCCAGCCTTCT
CACTTGCGTGCGGCACATATTTGGGGGGCGGGAATTCAACCTGTCCGGGCTTGCGGCCCAGATTACCAACCATGGCAGAC
CCGCACAGAAATTGCACACCGATCAGGACCAGTTGCCGCTCGATCCATCGAAGGCTTACGTCGCCAACATCTTGGTGATG
GTCAGCGATTTTACAGAAGCAAACGGTGCCACGCGGGTGATTCCGGGCTCGCACCTTTGGCCGCGCCCGCCCTGGTCGCG
CAGCCCCAATACCGCCCCGGATTACCCCTTCCGCACCATGGGCATTCCAGCCCCGCCGATGACTACAATTGCGGTAGAAG
GTCCGGCAGGCAGCGCCCTTATTCTCGACGGTCGCGTATGGCACGGCGCGGGAGCGCATGCCGCACCCGGAGTTACCCGA
TATGCTGTGGCGTCATCCTATGTACTGCCTTTTATCAGGCAATACGAGAATTTTCCGGCGAATATCCTGCCCGAAATATT
CGAGGCCTTGTCCAGCGACGAGCGACATCTCCTGGGGTATGCGGGATACAAGGGATCGCTGGGCTATGTCGAGCCAAAGG
CTTCCCGGATCGGTGAGAGCGCACCAGCAGGCTAA

Upstream 100 bases:

>100_bases
GCCGATTTTCCTCGGTAGTTTAGTCGTAAATCCATTCTGTTTCATATTAAGCTTGCTCAGTCAGGCTGAAGCCGTGTCCT
GCATTCCCGGGAGAAGTGCA

Downstream 100 bases:

>100_bases
AGCGCGTCCGCCAACTGCTTCTGGTGGTTTTGAATGCGTAAGTTCAAAAAACAAGATCTTAGCTCGCTTTAGCTCTTATT
TTGTCGCATGTACGTTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNFTSGSLPVATRDVSQAKADLDQFGYAILADLVTGSGLEALRQRLVEQADAECAAGVALLHDVDDKPLSQEVARTIDQH
LVPRQILMMLYNKGKVFREIAHNPSLLTCVRHIFGGREFNLSGLAAQITNHGRPAQKLHTDQDQLPLDPSKAYVANILVM
VSDFTEANGATRVIPGSHLWPRPPWSRSPNTAPDYPFRTMGIPAPPMTTIAVEGPAGSALILDGRVWHGAGAHAAPGVTR
YAVASSYVLPFIRQYENFPANILPEIFEALSSDERHLLGYAGYKGSLGYVEPKASRIGESAPAG

Sequences:

>Translated_304_residues
MNFTSGSLPVATRDVSQAKADLDQFGYAILADLVTGSGLEALRQRLVEQADAECAAGVALLHDVDDKPLSQEVARTIDQH
LVPRQILMMLYNKGKVFREIAHNPSLLTCVRHIFGGREFNLSGLAAQITNHGRPAQKLHTDQDQLPLDPSKAYVANILVM
VSDFTEANGATRVIPGSHLWPRPPWSRSPNTAPDYPFRTMGIPAPPMTTIAVEGPAGSALILDGRVWHGAGAHAAPGVTR
YAVASSYVLPFIRQYENFPANILPEIFEALSSDERHLLGYAGYKGSLGYVEPKASRIGESAPAG
>Mature_304_residues
MNFTSGSLPVATRDVSQAKADLDQFGYAILADLVTGSGLEALRQRLVEQADAECAAGVALLHDVDDKPLSQEVARTIDQH
LVPRQILMMLYNKGKVFREIAHNPSLLTCVRHIFGGREFNLSGLAAQITNHGRPAQKLHTDQDQLPLDPSKAYVANILVM
VSDFTEANGATRVIPGSHLWPRPPWSRSPNTAPDYPFRTMGIPAPPMTTIAVEGPAGSALILDGRVWHGAGAHAAPGVTR
YAVASSYVLPFIRQYENFPANILPEIFEALSSDERHLLGYAGYKGSLGYVEPKASRIGESAPAG

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008775 [H]

Pfam domain/function: PF05721 PhyH [H]

EC number: NA

Molecular weight: Translated: 32829; Mature: 32829

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTSGSLPVATRDVSQAKADLDQFGYAILADLVTGSGLEALRQRLVEQADAECAAGVAL
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHH
LHDVDDKPLSQEVARTIDQHLVPRQILMMLYNKGKVFREIAHNPSLLTCVRHIFGGREFN
HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCEEC
LSGLAAQITNHGRPAQKLHTDQDQLPLDPSKAYVANILVMVSDFTEANGATRVIPGSHLW
HHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PRPPWSRSPNTAPDYPFRTMGIPAPPMTTIAVEGPAGSALILDGRVWHGAGAHAAPGVTR
CCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEECCEEECCCCCCCCCCHHH
YAVASSYVLPFIRQYENFPANILPEIFEALSSDERHLLGYAGYKGSLGYVEPKASRIGES
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCC
APAG
CCCC
>Mature Secondary Structure
MNFTSGSLPVATRDVSQAKADLDQFGYAILADLVTGSGLEALRQRLVEQADAECAAGVAL
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHH
LHDVDDKPLSQEVARTIDQHLVPRQILMMLYNKGKVFREIAHNPSLLTCVRHIFGGREFN
HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCEEC
LSGLAAQITNHGRPAQKLHTDQDQLPLDPSKAYVANILVMVSDFTEANGATRVIPGSHLW
HHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
PRPPWSRSPNTAPDYPFRTMGIPAPPMTTIAVEGPAGSALILDGRVWHGAGAHAAPGVTR
CCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEECCEEECCCCCCCCCCHHH
YAVASSYVLPFIRQYENFPANILPEIFEALSSDERHLLGYAGYKGSLGYVEPKASRIGES
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCC
APAG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]