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The map label for this gene is 222102520

Identifier: 222102520

GI number: 222102520

Start: 114792

End: 115490

Strand: Reverse

Name: 222102520

Synonym: Avi_7148

Alternate gene names: NA

Gene position: 115490-114792 (Counterclockwise)

Preceding gene: 222102525

Following gene: 222102518

Centisome position: 18.28

GC content: 54.36

Gene sequence:

>699_bases
ATGAACATTTCTTCGTCTACCTTCGCCTCCTATCGTTACAAACGTCACCGCTTTCCAGCCGAGATTATCGCTCACGCGGT
TTGGCTGTACTTCCGGTTTCCATTGAGCCTGCGGCATGTCGAGGATTTGCTGGCCGAACGCGGTATTGACGTTTCGTTCC
AGACAGTATCGGAATGGGCCGCCAAATTTGGCTCCGAGTTTGCTGCGTTGCTTCGCCGGCGCTCAAAGGGCGGCTTTGCC
GATAAATGGCACCTCGATGAGATGGTGGTAACCTTCAAAGGCCGGAAATACTGGCTCTGGCGCGCCGTCGATGCTGAAGG
CTATATGCTTGAAGCCCTTTTGCAAAGCCGTCGCAACAAAAAGGCAGCTCTGAAATTGATGCGCAAATTGCTCAAAGGCC
AGGGCCTCACACCCCGTGTGATGGTGACCGACAAACTCCGGTCCTACGATGCCGCTAAACGCGATATCATGCCCGGCGTT
GAACATCGTTCGCATAAGGGGCTGAACAATCGGGCCGAAAATTCCCATCTACCCATAAGGCGGAGAGAACGGATCATGAT
GCGGTTCAAGTCTGCCGCGCAATGCCAACGTTTCGTTTCAACCCACGGACCGATTCCAATCTCTTTCTGGTTCACCGCAA
CATCAAATTGCCGCCGATCACCGAACGCTTCGCACCGAGGCTATGGCCGTCTGGCGTGA

Upstream 100 bases:

>100_bases
CTGGGAATGGGCTTTTCGCAAATTTTTCGGCTTAACGCGGTGTTGACCATCATCAGAGATGACAGTGTCGCCTTAAGTTT
TGTACGATAGAGCAGTGGGC

Downstream 100 bases:

>100_bases
AATCACGCTGCCACACGCCACATAAAGTCGACCGCCGCTGCCATCTGACGTCCTGTTCAAGTTAAGGCGACGCTGCCTGC
TCGCTGTCCCGTCGCAGATT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNISSSTFASYRYKRHRFPAEIIAHAVWLYFRFPLSLRHVEDLLAERGIDVSFQTVSEWAAKFGSEFAALLRRRSKGGFA
DKWHLDEMVVTFKGRKYWLWRAVDAEGYMLEALLQSRRNKKAALKLMRKLLKGQGLTPRVMVTDKLRSYDAAKRDIMPGV
EHRSHKGLNNRAENSHLPIRRRERIMMRFKSAAQCQRFVSTHGPIPISFWFTATSNCRRSPNASHRGYGRLA

Sequences:

>Translated_232_residues
MNISSSTFASYRYKRHRFPAEIIAHAVWLYFRFPLSLRHVEDLLAERGIDVSFQTVSEWAAKFGSEFAALLRRRSKGGFA
DKWHLDEMVVTFKGRKYWLWRAVDAEGYMLEALLQSRRNKKAALKLMRKLLKGQGLTPRVMVTDKLRSYDAAKRDIMPGV
EHRSHKGLNNRAENSHLPIRRRERIMMRFKSAAQCQRFVSTHGPIPISFWFTATSNCRRSPNASHRGYGRLA
>Mature_232_residues
MNISSSTFASYRYKRHRFPAEIIAHAVWLYFRFPLSLRHVEDLLAERGIDVSFQTVSEWAAKFGSEFAALLRRRSKGGFA
DKWHLDEMVVTFKGRKYWLWRAVDAEGYMLEALLQSRRNKKAALKLMRKLLKGQGLTPRVMVTDKLRSYDAAKRDIMPGV
EHRSHKGLNNRAENSHLPIRRRERIMMRFKSAAQCQRFVSTHGPIPISFWFTATSNCRRSPNASHRGYGRLA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27016; Mature: 27016

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISSSTFASYRYKRHRFPAEIIAHAVWLYFRFPLSLRHVEDLLAERGIDVSFQTVSEWA
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AKFGSEFAALLRRRSKGGFADKWHLDEMVVTFKGRKYWLWRAVDAEGYMLEALLQSRRNK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHHHCCH
KAALKLMRKLLKGQGLTPRVMVTDKLRSYDAAKRDIMPGVEHRSHKGLNNRAENSHLPIR
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHH
RRERIMMRFKSAAQCQRFVSTHGPIPISFWFTATSNCRRSPNASHRGYGRLA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNISSSTFASYRYKRHRFPAEIIAHAVWLYFRFPLSLRHVEDLLAERGIDVSFQTVSEWA
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
AKFGSEFAALLRRRSKGGFADKWHLDEMVVTFKGRKYWLWRAVDAEGYMLEALLQSRRNK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCEEEEEEEECCCCHHHHHHHHHHCCH
KAALKLMRKLLKGQGLTPRVMVTDKLRSYDAAKRDIMPGVEHRSHKGLNNRAENSHLPIR
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHH
RRERIMMRFKSAAQCQRFVSTHGPIPISFWFTATSNCRRSPNASHRGYGRLA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]