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The map label for this gene is 222102478

Identifier: 222102478

GI number: 222102478

Start: 76152

End: 76820

Strand: Reverse

Name: 222102478

Synonym: Avi_7085

Alternate gene names: NA

Gene position: 76820-76152 (Counterclockwise)

Preceding gene: 222102479

Following gene: 222102472

Centisome position: 12.16

GC content: 55.16

Gene sequence:

>669_bases
TTGCTGGGCACAGCCAGCGCCGCAACACTGGCCGCAAGCGTCGATGTCCGGTGCCTGCGTTTGCGAAACGACGTGGACCT
TCGGTTCAAGTGCGCCATTTTCAGGGTGAGGTTATCCTTTGGGCGGTACGCTGGTACTGTCATTAAGGTTCGCGGACGAT
GGACTTATCTCTACCGGGCTGTCGACAAACTCGGCAACACGATTGATTTTTATCTTTCCCCGACCCGCAATGCCAAAGCG
GCGAAGCGCTTTCTCGACAAAGCCTTAAATGACCTGAAGGATTGGGAGACACCGACCGTCATCAACGCCGACAAGGCACC
GACCTACCGTATCGCGCTTTCGCAACTGAAGACTAAAGGCAAATACCCCGCAGAGTTCATGCACCGGCAGGTCAAATATC
TGAACACCGTCATTGAGGCTGATCACGGCAAGCTGAAGCAGTTGATCAGATCGGTGAGAGGGTTCAAAACGCTGAAAACC
GCCTACGCCACGATCAAGGGTTTTGAGGTCATGCGCGCTGTGCGCAAAGGTCAGGCAGCCATTTTCAACCTGACGGGCGA
CATTTGTGGAGAAGCAAGGATCGATGAGCGTACTTTCGGTATCGGGCCAAACGCTCTCACGGAAGCCTCGGCACTGCTCG
CCCAGAACCGAGAAAGTCAGGCCGCTTGA

Upstream 100 bases:

>100_bases
CTCGCGCCATTCCTCACCAAGCCCTATTCGGAGCAAGATGTACGTGCGCTGGTCAATAGCATCTTTTGAACAACTGCACT
GATAGCGGAACCGACCCCTA

Downstream 100 bases:

>100_bases
CGAAGTAGGTTAGGGAATTTCGTTTCGATTTGAAATCTTTGCAACAGAGCCCATTTTCCAGTTTTGGCGACGGAACGAAA
TTTCAGATGCGAGTAAGAAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLGTASAATLAASVDVRCLRLRNDVDLRFKCAIFRVRLSFGRYAGTVIKVRGRWTYLYRAVDKLGNTIDFYLSPTRNAKA
AKRFLDKALNDLKDWETPTVINADKAPTYRIALSQLKTKGKYPAEFMHRQVKYLNTVIEADHGKLKQLIRSVRGFKTLKT
AYATIKGFEVMRAVRKGQAAIFNLTGDICGEARIDERTFGIGPNALTEASALLAQNRESQAA

Sequences:

>Translated_222_residues
MLGTASAATLAASVDVRCLRLRNDVDLRFKCAIFRVRLSFGRYAGTVIKVRGRWTYLYRAVDKLGNTIDFYLSPTRNAKA
AKRFLDKALNDLKDWETPTVINADKAPTYRIALSQLKTKGKYPAEFMHRQVKYLNTVIEADHGKLKQLIRSVRGFKTLKT
AYATIKGFEVMRAVRKGQAAIFNLTGDICGEARIDERTFGIGPNALTEASALLAQNRESQAA
>Mature_222_residues
MLGTASAATLAASVDVRCLRLRNDVDLRFKCAIFRVRLSFGRYAGTVIKVRGRWTYLYRAVDKLGNTIDFYLSPTRNAKA
AKRFLDKALNDLKDWETPTVINADKAPTYRIALSQLKTKGKYPAEFMHRQVKYLNTVIEADHGKLKQLIRSVRGFKTLKT
AYATIKGFEVMRAVRKGQAAIFNLTGDICGEARIDERTFGIGPNALTEASALLAQNRESQAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24839; Mature: 24839

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTASAATLAASVDVRCLRLRNDVDLRFKCAIFRVRLSFGRYAGTVIKVRGRWTYLYRA
CCCCCHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
VDKLGNTIDFYLSPTRNAKAAKRFLDKALNDLKDWETPTVINADKAPTYRIALSQLKTKG
HHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCC
KYPAEFMHRQVKYLNTVIEADHGKLKQLIRSVRGFKTLKTAYATIKGFEVMRAVRKGQAA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IFNLTGDICGEARIDERTFGIGPNALTEASALLAQNRESQAA
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLGTASAATLAASVDVRCLRLRNDVDLRFKCAIFRVRLSFGRYAGTVIKVRGRWTYLYRA
CCCCCHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
VDKLGNTIDFYLSPTRNAKAAKRFLDKALNDLKDWETPTVINADKAPTYRIALSQLKTKG
HHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCC
KYPAEFMHRQVKYLNTVIEADHGKLKQLIRSVRGFKTLKTAYATIKGFEVMRAVRKGQAA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IFNLTGDICGEARIDERTFGIGPNALTEASALLAQNRESQAA
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]