| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102448
Identifier: 222102448
GI number: 222102448
Start: 43451
End: 43663
Strand: Reverse
Name: 222102448
Synonym: Avi_7047
Alternate gene names: NA
Gene position: 43663-43451 (Counterclockwise)
Preceding gene: 222102449
Following gene: 222102447
Centisome position: 6.91
GC content: 59.15
Gene sequence:
>213_bases ATGGCGCGGTTCTATGCGCTTGCTGTTCAGCCGACATTGTTCGGAGAGGTGTCGCTTGCGCGCGCCTGGGGCCGGATCGG AACGCGCGGACAGCAGATGTTGCTTCTGTTCGACAATGAGAACCAGGCCACCAACCTGTTCCTCGACGTGCTTCGCGAGA AGCGCAAACGAGGTTATCGGCCAAAACGACCTGTGGACATCCAGCGGATCTGA
Upstream 100 bases:
>100_bases CTGTTTTTGATCCGGGCCGTATAGACGCAGAACATTGGAATTTGATCCCCGTACCAACGCGCTACCACGTCTATGTCGAG CGTATCCGCCGGAATAGAAC
Downstream 100 bases:
>100_bases CCCTCGTCCCCATCGTCGCCGATGACAACCCGGTCATAAGCTGACACGGATTTTATCTTTGACAGGAAGATACGAGGAAT CGTATCCATCCGAGCAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MARFYALAVQPTLFGEVSLARAWGRIGTRGQQMLLLFDNENQATNLFLDVLREKRKRGYRPKRPVDIQRI
Sequences:
>Translated_70_residues MARFYALAVQPTLFGEVSLARAWGRIGTRGQQMLLLFDNENQATNLFLDVLREKRKRGYRPKRPVDIQRI >Mature_69_residues ARFYALAVQPTLFGEVSLARAWGRIGTRGQQMLLLFDNENQATNLFLDVLREKRKRGYRPKRPVDIQRI
Specific function: Unknown
COG id: COG3831
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008893 [H]
Pfam domain/function: PF05406 WGR [H]
EC number: NA
Molecular weight: Translated: 8192; Mature: 8061
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFYALAVQPTLFGEVSLARAWGRIGTRGQQMLLLFDNENQATNLFLDVLREKRKRGYR CCEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC PKRPVDIQRI CCCCCCCCCC >Mature Secondary Structure ARFYALAVQPTLFGEVSLARAWGRIGTRGQQMLLLFDNENQATNLFLDVLREKRKRGYR CEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC PKRPVDIQRI CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]