Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102447

Identifier: 222102447

GI number: 222102447

Start: 43079

End: 43312

Strand: Reverse

Name: 222102447

Synonym: Avi_7046

Alternate gene names: NA

Gene position: 43312-43079 (Counterclockwise)

Preceding gene: 222102448

Following gene: 222102443

Centisome position: 6.86

GC content: 54.7

Gene sequence:

>234_bases
ATGGAGATTGATGAGGACAAGATCGATGACGCGGTTTTGGCACTGCTATGGCTGACGCTGCATAACGAGGGTTGTGCGTG
GAAAGGCTTCGACTGGGCAACGACGGATCGACTTCATAAGAAGGGCATGATCGGCGACCCGGTTAACACGTCAAAGTCGT
TGATCCTGACCGATGAAGGCTTGGAGCGTTCGGAGGCGTTGTTCCGAGAGTTGTTCACCCGACCGGCGCTATAG

Upstream 100 bases:

>100_bases
AGCTGACACGGATTTTATCTTTGACAGGAAGATACGAGGAATCGTATCCATCCGAGCAGAACCGCGGGATTTTGCTCGCC
GCGCGTGATAATGTGGGTCC

Downstream 100 bases:

>100_bases
CTATCCCTTTGCGCAACTTCCATTGCCAAGGCAGCAGTTCGTGCAGGCGGGTGACGGGGAGATCGGCGATGCGGGTGAAC
ACATCGGCAAGCCATGCCTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MEIDEDKIDDAVLALLWLTLHNEGCAWKGFDWATTDRLHKKGMIGDPVNTSKSLILTDEGLERSEALFRELFTRPAL

Sequences:

>Translated_77_residues
MEIDEDKIDDAVLALLWLTLHNEGCAWKGFDWATTDRLHKKGMIGDPVNTSKSLILTDEGLERSEALFRELFTRPAL
>Mature_77_residues
MEIDEDKIDDAVLALLWLTLHNEGCAWKGFDWATTDRLHKKGMIGDPVNTSKSLILTDEGLERSEALFRELFTRPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8759; Mature: 8759

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDEDKIDDAVLALLWLTLHNEGCAWKGFDWATTDRLHKKGMIGDPVNTSKSLILTDEG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCC
LERSEALFRELFTRPAL
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEIDEDKIDDAVLALLWLTLHNEGCAWKGFDWATTDRLHKKGMIGDPVNTSKSLILTDEG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCC
LERSEALFRELFTRPAL
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]