Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102449

Identifier: 222102449

GI number: 222102449

Start: 43932

End: 44465

Strand: Reverse

Name: 222102449

Synonym: Avi_7050

Alternate gene names: NA

Gene position: 44465-43932 (Counterclockwise)

Preceding gene: 222102450

Following gene: 222102448

Centisome position: 7.04

GC content: 55.62

Gene sequence:

>534_bases
ATGTATGCGATTCACCGACTGGACATCGACAAGCACAGACAAGATGCCTGGATGGTCAATCTTTCTCGCGGCGGGAAATC
GATCCACATGACCTTCAGCGACAGCACCTATGGTGGGAAGGATCAGGCGCTGGAAGTGGCGCAAGCCTACCGCGATGCCG
TTCTCCGGGTCGTACCCCCATTGAGCAACAATGATATGCGCATGTTGGTGCGCAAAAATCGCTCAGAAGGCAGCAGCGTG
CCGGGCGTCTATTATATCGGACCCACCGGGGCGCATAAAACCGGTATCTGGATGGCTCGTATTGAGATCGCCCTTGATGA
TAACACGCCGGTCCCTGCGGGAAAGCGCCGCCGCCGACAGTTTACGCGCACCTTCAACGTCAGCAAATTCGGCTATGAGG
AAGCCCGCCGTATGGCGGAAGAAGAACGCATTCGCATGGTCATGGCTGTCGAAAATGGCGAAGATCCGGCTTTACGCAGC
CCGCAAGCTTTGAAACTTCATGAGAAGCTTACCCGAGACGACAACGACGATTAG

Upstream 100 bases:

>100_bases
GCCTGAGGCTGATTGGTCGAATGCGCGAAATCGGACGGCAATAACAATGATCAGACCACGACCTAAACTTGCTCCAGAGG
AGCGCTTCCATGACGAAGCT

Downstream 100 bases:

>100_bases
AGAAGGCGTTGTCTTCAGCACCACCAGAAAAACGGCCGCTTTTCTGGTGGTCGTGAATAGACCGATATTGGTGTGAGAAA
ATCACAAGAAAACCCGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MYAIHRLDIDKHRQDAWMVNLSRGGKSIHMTFSDSTYGGKDQALEVAQAYRDAVLRVVPPLSNNDMRMLVRKNRSEGSSV
PGVYYIGPTGAHKTGIWMARIEIALDDNTPVPAGKRRRRQFTRTFNVSKFGYEEARRMAEEERIRMVMAVENGEDPALRS
PQALKLHEKLTRDDNDD

Sequences:

>Translated_177_residues
MYAIHRLDIDKHRQDAWMVNLSRGGKSIHMTFSDSTYGGKDQALEVAQAYRDAVLRVVPPLSNNDMRMLVRKNRSEGSSV
PGVYYIGPTGAHKTGIWMARIEIALDDNTPVPAGKRRRRQFTRTFNVSKFGYEEARRMAEEERIRMVMAVENGEDPALRS
PQALKLHEKLTRDDNDD
>Mature_177_residues
MYAIHRLDIDKHRQDAWMVNLSRGGKSIHMTFSDSTYGGKDQALEVAQAYRDAVLRVVPPLSNNDMRMLVRKNRSEGSSV
PGVYYIGPTGAHKTGIWMARIEIALDDNTPVPAGKRRRRQFTRTFNVSKFGYEEARRMAEEERIRMVMAVENGEDPALRS
PQALKLHEKLTRDDNDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20234; Mature: 20234

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAIHRLDIDKHRQDAWMVNLSRGGKSIHMTFSDSTYGGKDQALEVAQAYRDAVLRVVPP
CCEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECC
LSNNDMRMLVRKNRSEGSSVPGVYYIGPTGAHKTGIWMARIEIALDDNTPVPAGKRRRRQ
CCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHH
FTRTFNVSKFGYEEARRMAEEERIRMVMAVENGEDPALRSPQALKLHEKLTRDDNDD
HHHHCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYAIHRLDIDKHRQDAWMVNLSRGGKSIHMTFSDSTYGGKDQALEVAQAYRDAVLRVVPP
CCEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECC
LSNNDMRMLVRKNRSEGSSVPGVYYIGPTGAHKTGIWMARIEIALDDNTPVPAGKRRRRQ
CCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHH
FTRTFNVSKFGYEEARRMAEEERIRMVMAVENGEDPALRSPQALKLHEKLTRDDNDD
HHHHCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA