| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102442
Identifier: 222102442
GI number: 222102442
Start: 39527
End: 39943
Strand: Reverse
Name: 222102442
Synonym: Avi_7041
Alternate gene names: NA
Gene position: 39943-39527 (Counterclockwise)
Preceding gene: 222102443
Following gene: 222102440
Centisome position: 6.32
GC content: 60.91
Gene sequence:
>417_bases ATGGTTGCCTTGACGTTGAGGTTGAGGGTCTTGATGGTGCCGGAGAAGCCGTTGCCGGAAGCGGTGAAAGAGCCGATGGT TGCCATTGTCGTAATCCCTTTACGGTTGTTCGGGCCGCGTCCATCGCGGCCTCGATGGCAGTCGATAGGACCGGGGACGA TCGGCCTGCATCCAACGGACCGAAACGGAGTGGAGGACGGCCAGGGAGAGGCTTTCTTGCCTCGCGAGGAATGGGCGCTT CAGCGCACAGGGGAAGAAAACGAGCCGGCCGTTGCGGATGCCGATCGAGCCGAGCCTCGCGAGGCGGTCTTTGGTCAGAC ATGCCCCATCGAGACCGCAGTGGACGTGCCGGCTGACAGATCAAGTGGTACGACTATGGCATTATCGGGAGGTGCCGAAT GGGAACAGGTTGCATAG
Upstream 100 bases:
>100_bases TTCGTTCGAGGTCTTCTTCCAGGCGGCGCCGAATTCGACCGTAGCCCCGGCGAGGATGCGGTAGTCCGGTCCCTTTTCGG AAGTGCGCTCGACGGCGCGG
Downstream 100 bases:
>100_bases TGGCCACAACTCCCAATCGAATGGTCGTAGCGAACGCCCACATGTGACAGATTGCCGGAACGAGCACTATGCCTCCTCGC TTAGGCTCAGACGAGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MVALTLRLRVLMVPEKPLPEAVKEPMVAIVVIPLRLFGPRPSRPRWQSIGPGTIGLHPTDRNGVEDGQGEAFLPREEWAL QRTGEENEPAVADADRAEPREAVFGQTCPIETAVDVPADRSSGTTMALSGGAEWEQVA
Sequences:
>Translated_138_residues MVALTLRLRVLMVPEKPLPEAVKEPMVAIVVIPLRLFGPRPSRPRWQSIGPGTIGLHPTDRNGVEDGQGEAFLPREEWAL QRTGEENEPAVADADRAEPREAVFGQTCPIETAVDVPADRSSGTTMALSGGAEWEQVA >Mature_138_residues MVALTLRLRVLMVPEKPLPEAVKEPMVAIVVIPLRLFGPRPSRPRWQSIGPGTIGLHPTDRNGVEDGQGEAFLPREEWAL QRTGEENEPAVADADRAEPREAVFGQTCPIETAVDVPADRSSGTTMALSGGAEWEQVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14961; Mature: 14961
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALTLRLRVLMVPEKPLPEAVKEPMVAIVVIPLRLFGPRPSRPRWQSIGPGTIGLHPTD CEEEEEEEEEEECCCCCCCHHHHCCEEEEEEEEHHHCCCCCCCCCCCCCCCCEEECCCCC RNGVEDGQGEAFLPREEWALQRTGEENEPAVADADRAEPREAVFGQTCPIETAVDVPADR CCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCCC SSGTTMALSGGAEWEQVA CCCCEEEEECCCCCCCCC >Mature Secondary Structure MVALTLRLRVLMVPEKPLPEAVKEPMVAIVVIPLRLFGPRPSRPRWQSIGPGTIGLHPTD CEEEEEEEEEEECCCCCCCHHHHCCEEEEEEEEHHHCCCCCCCCCCCCCCCCEEECCCCC RNGVEDGQGEAFLPREEWALQRTGEENEPAVADADRAEPREAVFGQTCPIETAVDVPADR CCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCCC SSGTTMALSGGAEWEQVA CCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA