Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636159

Identifier: 221636159

GI number: 221636159

Start: 739479

End: 740294

Strand: Reverse

Name: 221636159

Synonym: trd_A0753

Alternate gene names: NA

Gene position: 740294-739479 (Counterclockwise)

Preceding gene: 221636161

Following gene: 221636158

Centisome position: 80.67

GC content: 66.18

Gene sequence:

>816_bases
ATGAGGCAACTGATCACCGTCGTCATCACCCTCGCACTGCTTGCAGCCGTTCCGTTCACGGTTTTGGCTGCGGGCCATGA
GAAGGCGCAGCTCACTGTGGTGCACGGAGTCCCGGACCTGGTCGTGGATGTCTACGCCAACGATGCGAAGGTGCTGTCCA
ATTTCACCTTCGGCACGGTGACCGATCCCCTGGCGCTCGATCCCGGTACCTACAAGCTGGCGATCCGGCCGGCCGGGGCT
GACCCAGCGAGCGCTCCAGTCCTCTCGGCCGAAGCCACGTTGGCTGCTGGCCAGAACGCGTCGGTCGTCGCTCACCTGGA
TGCCAACGGGCAGCCGCGCCTGAGCATCTTCGTCAACGACACATCCCCGGTGGCGAGCGGTAAGGGACGCCTCATCGTCC
GCCATACTGCGCAGGCGCCGGCGGTGGACGTGCGGGCTGGTGGCGCGGTCGTATTCGCCAATCTGGCGAATCCGAACGAG
GCCAAGGCGGACGTCGATGCCAAGACCTATTCGGTCGACCTGGCGCCGGCTGGGCAGGCGCAGGCTGTGTTCGGGCCGGT
CGACTTGCCGGTGGCAGCCGGAGCAGCGACGATCGTCTATGCCATCGGATCGATCGAAAAAGGCTCCTTCCGGCTGGTGA
CCCAGGTGATCACCGGTTTGGGTGCTCCACCCAGCCATGTCGGGACCGGTGGGGGTAGTGCCGCCAACGCGACGCTGCCG
TTGACGGTCGCGGTGCTGGCCGCGCTGCTGGTGTTGGCTGGTAGTGCGGCGCTCGTCCGCGTGCCGGTTCGCATCGAACG
CCGCAATCTCCGGTAA

Upstream 100 bases:

>100_bases
CCTTGGCGCACGATGGGTGGTGCTGCTATACTACGGTTGCACGCGCGTGTAGGTAGGAGTTAGCATAAACAAAGATTAGG
TAGAATCCAAGGGGGACGCC

Downstream 100 bases:

>100_bases
TGGCGCCTCTCCCTCCCGTCGCAGCGGGTGCTCCGGTTTCGATCAGGGCACCCGCTGCTTTCGGTCGCAGACGTTCCCAG
CGAGGATCGTCATGACCGCA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRQLITVVITLALLAAVPFTVLAAGHEKAQLTVVHGVPDLVVDVYANDAKVLSNFTFGTVTDPLALDPGTYKLAIRPAGA
DPASAPVLSAEATLAAGQNASVVAHLDANGQPRLSIFVNDTSPVASGKGRLIVRHTAQAPAVDVRAGGAVVFANLANPNE
AKADVDAKTYSVDLAPAGQAQAVFGPVDLPVAAGAATIVYAIGSIEKGSFRLVTQVITGLGAPPSHVGTGGGSAANATLP
LTVAVLAALLVLAGSAALVRVPVRIERRNLR

Sequences:

>Translated_271_residues
MRQLITVVITLALLAAVPFTVLAAGHEKAQLTVVHGVPDLVVDVYANDAKVLSNFTFGTVTDPLALDPGTYKLAIRPAGA
DPASAPVLSAEATLAAGQNASVVAHLDANGQPRLSIFVNDTSPVASGKGRLIVRHTAQAPAVDVRAGGAVVFANLANPNE
AKADVDAKTYSVDLAPAGQAQAVFGPVDLPVAAGAATIVYAIGSIEKGSFRLVTQVITGLGAPPSHVGTGGGSAANATLP
LTVAVLAALLVLAGSAALVRVPVRIERRNLR
>Mature_271_residues
MRQLITVVITLALLAAVPFTVLAAGHEKAQLTVVHGVPDLVVDVYANDAKVLSNFTFGTVTDPLALDPGTYKLAIRPAGA
DPASAPVLSAEATLAAGQNASVVAHLDANGQPRLSIFVNDTSPVASGKGRLIVRHTAQAPAVDVRAGGAVVFANLANPNE
AKADVDAKTYSVDLAPAGQAQAVFGPVDLPVAAGAATIVYAIGSIEKGSFRLVTQVITGLGAPPSHVGTGGGSAANATLP
LTVAVLAALLVLAGSAALVRVPVRIERRNLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27316; Mature: 27316

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLITVVITLALLAAVPFTVLAAGHEKAQLTVVHGVPDLVVDVYANDAKVLSNFTFGTV
CHHHHHHHHHHHHHHHCCHHEEECCCCCEEEEEEECCCCEEEEEECCCHHHHHCCCCCCC
TDPLALDPGTYKLAIRPAGADPASAPVLSAEATLAAGQNASVVAHLDANGQPRLSIFVND
CCCEEECCCCEEEEEEECCCCCCCCCEEECCEEEECCCCCEEEEEECCCCCCEEEEEEEC
TSPVASGKGRLIVRHTAQAPAVDVRAGGAVVFANLANPNEAKADVDAKTYSVDLAPAGQA
CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCC
QAVFGPVDLPVAAGAATIVYAIGSIEKGSFRLVTQVITGLGAPPSHVGTGGGSAANATLP
CEEECCCCCCHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
LTVAVLAALLVLAGSAALVRVPVRIERRNLR
HHHHHHHHHHHHCCCCEEEEEEEEEECCCCC
>Mature Secondary Structure
MRQLITVVITLALLAAVPFTVLAAGHEKAQLTVVHGVPDLVVDVYANDAKVLSNFTFGTV
CHHHHHHHHHHHHHHHCCHHEEECCCCCEEEEEEECCCCEEEEEECCCHHHHHCCCCCCC
TDPLALDPGTYKLAIRPAGADPASAPVLSAEATLAAGQNASVVAHLDANGQPRLSIFVND
CCCEEECCCCEEEEEEECCCCCCCCCEEECCEEEECCCCCEEEEEECCCCCCEEEEEEEC
TSPVASGKGRLIVRHTAQAPAVDVRAGGAVVFANLANPNEAKADVDAKTYSVDLAPAGQA
CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCC
QAVFGPVDLPVAAGAATIVYAIGSIEKGSFRLVTQVITGLGAPPSHVGTGGGSAANATLP
CEEECCCCCCHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
LTVAVLAALLVLAGSAALVRVPVRIERRNLR
HHHHHHHHHHHHCCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA