| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is fliE [H]
Identifier: 221636058
GI number: 221636058
Start: 644176
End: 644475
Strand: Reverse
Name: fliE [H]
Synonym: trd_A0652
Alternate gene names: 221636058
Gene position: 644475-644176 (Counterclockwise)
Preceding gene: 221636059
Following gene: 221636057
Centisome position: 70.22
GC content: 64.0
Gene sequence:
>300_bases GTGAGCATCGCGCCGATTCCACCGATCTCCGCTGAGATCGCGCCGGTCGGGACGGCGGCTGCGCCCAAGCCAGCAGCTGG CCCGTCGTTCGGGGCGGTTCTCGAGCGTGCACTCGGCTCCTTGAATCAGCAGATCAACGAAGCGGATCGGCTGGCACTCG CATTGGCAGCTGGGGAAGACGTGGATCTCCACGAGGTCATGCTCGCCCTGGAGACAGCGTCGATCGGATTGCAGGCTGCG CTGCAGATCCGCAACCGGGCACTGGAAGCCTATCGTGAAGTGATGTCGATGCCGATCTGA
Upstream 100 bases:
>100_bases GGCCAACGTCACAGTTCTCGATGCCTTGAAGACGATGGCGATGCGTGCCTTGAGCATCGGGCGTGCCTGAGCCGGTCGGC GGTAAGGGAGGGAGGCCGAC
Downstream 100 bases:
>100_bases CGAATCGAAGGGTACAGGCGAGGACGATGCTGCGGCGATTCGCCCCATATTGGGAGAGTGTCAGGGAGCGATGGGACGGT CTGAGCCAGAACCGGCGAGT
Product: flagellar hook-basal body complex protein FliE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSIAPIPPISAEIAPVGTAAAPKPAAGPSFGAVLERALGSLNQQINEADRLALALAAGEDVDLHEVMLALETASIGLQAA LQIRNRALEAYREVMSMPI
Sequences:
>Translated_99_residues MSIAPIPPISAEIAPVGTAAAPKPAAGPSFGAVLERALGSLNQQINEADRLALALAAGEDVDLHEVMLALETASIGLQAA LQIRNRALEAYREVMSMPI >Mature_98_residues SIAPIPPISAEIAPVGTAAAPKPAAGPSFGAVLERALGSLNQQINEADRLALALAAGEDVDLHEVMLALETASIGLQAAL QIRNRALEAYREVMSMPI
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliE family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001624 [H]
Pfam domain/function: PF02049 FliE [H]
EC number: NA
Molecular weight: Translated: 10228; Mature: 10097
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAPIPPISAEIAPVGTAAAPKPAAGPSFGAVLERALGSLNQQINEADRLALALAAGED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VDLHEVMLALETASIGLQAALQIRNRALEAYREVMSMPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIAPIPPISAEIAPVGTAAAPKPAAGPSFGAVLERALGSLNQQINEADRLALALAAGED CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VDLHEVMLALETASIGLQAALQIRNRALEAYREVMSMPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905667; 9384377 [H]